Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03025 ATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGGCAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCGCTGCAATATAATCAATTATACGGCGCAATTCCAGCGAGTTTGGGTGAATTGGAGTCACTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATACGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGTTATGGTATCGGCATCAGAAATTGAAAATTGGACGCACTGCTAACACTACTAGCAAGATGAAGGAAGCACGCAAGAAAATTTCATCTCCTCTGATAAGTTTGGAGTACTCCAATGGATGGGATCCATTAGCCAAAGGGCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAACGTTGAAGATGTGGAACGCGCAACACAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATATTGAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTGTCCCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTCTAGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCTGGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTGCTGGCAGACGACGTCGTCTTCTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCCGAATACACGAAAACGGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTTCAACTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGACGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGAGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGTGACTAA 1581 0.4402 MSILSLVISLVRLPTSLIFKAVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELESLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGRTANTTSKMKEARKKISSPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFVPNGSLLRCLDDAKVLEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDAGYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQTVQVDDKLEGKFSESEAEKLWGVALLCTHESPHLRPYMEDVIQELCD 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03025 526 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 21 524 - -
Aip06g03025 526 Pfam Protein tyrosine and serine/threonine kinase 274 524 IPR001245 GO:0004672|GO:0006468
Aip06g03025 526 SUPERFAMILY Protein kinase-like (PK-like) 247 524 IPR011009 -
Aip06g03025 526 ProSiteProfiles Protein kinase domain profile. 270 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03025 526 Gene3D Phosphorylase Kinase; domain 1 242 348 - -
Aip06g03025 526 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 524 - -
Aip06g03025 526 ProSitePatterns Protein kinases ATP-binding region signature. 276 302 IPR017441 GO:0005524
Aip06g03025 526 SUPERFAMILY L domain-like 22 114 - -
Aip06g03025 526 Gene3D Transferase(Phosphotransferase) domain 1 350 526 - -
Aip06g03025 526 Gene3D Ribonuclease Inhibitor 7 138 IPR032675 -
Aip06g03025 526 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03025 Aip-Chr6 124867626 124871520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03025 22 379 Miscellaneous Gene Families AT4G22730 43.445 2.58e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip06g03025 PK_Tyr_Ser-Thr 7.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03025 - - adu:107495059 971.074