Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03023 atgagacatagtgaccttccgtcgatcgcagCCTTCTGGGATTCTCCCAAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATATTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTTAAAGGCCCAAGGTCGAGAATTTACAGTAATTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTTAGAAGCAGAGGCTCATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATTGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAATAAGATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACAGACACCCTCTTGTTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGTCAGTTCTCCTTCTTCCATTGCTATGCATTACTAA 612 0.4069 MRHSDLPSIAAFWDSPKLTRSCSNLERRDILGNTIHQFPDSKSQSFENLQELTAGKVAANLKGPRSRIYSNSPVEPYVGQEFELEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKIRSGSWVVTRFVKEHRHPLVGPGGGRRDFIYEQYPVSSPSSIAMHY 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03023 203 Pfam FAR1 DNA-binding domain 91 177 IPR004330 -
Aip06g03023 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 63 192 - -
Aip06g03023 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 63 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03023 Aip-Chr6 124818126 124822132 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g03023 FAR1 2e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03023 - - aip:107647603 393.66