Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03013 ATGGCAGAGTCAGGGAGGTATTGTTACAGGGACGTGGTTCCATTCTGTGCAATGGTTGCAGTTGAGTGTACCAACGTCGGTGTCAACGTTCTTTTCAAACAAGCTACTCTCAAGGGATTCAGTTACTACGCATTCATCGTTTATTCTTTCGCTCTCTCCACTCTTTTTCTTCTTCTCCCTCTCCCCTTCGTCTTCCGATGGTCAAGAGGGCTTCCTCCATTCAATGTTTCTCTCATCTTAAGAATTTTTCTCCTCGGTACCATTGGATTTGTAGCACAACTGAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTCTTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCGGTGTTTTTCAGGATGGAGAAGATTTCTCCAAAAAGTTGGAGCACTCAGGCCAAAATCGTGGGTTCTTTAGTGTCAATATTAGGTGCACTCATAGTTGTTCTCTACAAGGGTCCAACATTGATCTCAGCTTCATCATCACCACACCAGTCACCTCATGTTGATTTTCTAAAGGACTCATCACCGCAGCAAAATTGGGTTCTTGGAGGCTTCCTTATTGCCATTGAGTTTATTCTGGTTCCAATTTGGTATATTGTTCAGACCAATGTGATCAAAGACTATCCAGCCGAGATTATTGTGGTGTTCTTTTACAACTTGTGTGGGACTCTCATATCTGCACCTGTGTGCTTACTATTAGATGAATCAAACTTAAGTGGTTGGATTATAAAACCAGATATAACATTAGTCGCCATTTTGTACTCTGGATTCTTTTGCACAGGCCTAAGCAGTTTGGTCCATACATGGGGTATCCATATTAAAGGCCCTGTATACGTATCAAGTTTCAAGCCTGTGTCTATAGGCATAGCTGCTGCTTTCAGTGCTATATTTCTTGGTGATGCACTATATTTGGGCATTGTTGTTGGAGGAGTAATAATATCAATTGGGTTTTATGCTGTTTTATGGGGCAAAGCAAACGAAGAATTGAGTGAGTACATTGATTCAAGCCAAAGTCAACCCACATCAAAAGTCAACCAGCCTTTGTTATTATAG 1077 0.415 MAESGRYCYRDVVPFCAMVAVECTNVGVNVLFKQATLKGFSYYAFIVYSFALSTLFLLLPLPFVFRWSRGLPPFNVSLILRIFLLGTIGFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFRMEKISPKSWSTQAKIVGSLVSILGALIVVLYKGPTLISASSSPHQSPHVDFLKDSSPQQNWVLGGFLIAIEFILVPIWYIVQTNVIKDYPAEIIVVFFYNLCGTLISAPVCLLLDESNLSGWIIKPDITLVAILYSGFFCTGLSSLVHTWGIHIKGPVYVSSFKPVSIGIAAAFSAIFLGDALYLGIVVGGVIISIGFYAVLWGKANEELSEYIDSSQSQPTSKVNQPLLL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03013 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Aip06g03013 358 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020|GO:0016021
Aip06g03013 358 PANTHER WAT1-RELATED PROTEIN 13 336 - -
Aip06g03013 358 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016021|GO:0022857
Aip06g03013 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03013 Aip-Chr6 124579816 124585200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03013 1 348 Nodulin-like Gene Family AT5G40240 54.366 3.07e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03013 - - gmx:100805667 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03013 06 124579816 124585200 Aip06g03013 06 124579816 124585200 ECH