Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03012 ATGGCATCATCAGGTAGATGTTATTGGTACATGAACGTGGTTCCATTGTGTGCAATGGTGGCAGTTGAATGCTTCAGCGTTGTTTCCAGCGTTCTATTCAAAGCAGCCACTCAGAAAGGCTTGAGTTACTATGTTTTCATTGCTTATTCATATGCCATCTCCACCTTTATTCTTCTTCTGCCTTTTCCCTTCATCTTCTTCACCACCAGGTCAAGTGGATTGCCCACATTTAAAGCCTCGTTGGTCGGTAGGATTTTTCTTCTTGGAGTCATTGGGTTTGTATTTCAACTTATTGGATATAAAGGACTTGAGTTTAGTTCACCTACTCTCGCTTCTGCTCTCAGTAACCTTATTCCCGCTTTTACTTACGTACTCGCTATTTTATTCAGGATGGAAAAAGCAACATTGAAAAGCTCGAGCACTCAGGCCAAAATAATAGGTTCAATTATATCAATCATTGGTGCCCTTGTAGTAACTCTCTACAAGGGCCCTGTTGTGTTATCTGCTTCTTCTTCATCATCACTACTCAGCTCATCGTCTTCACAAGGGGATTGGGTTCTTGGGGCCTTCTTACTTGCTGCTTCATACACTTTACCTCCACTTTGGTATATTGTACAGACGCAAGTTATGGAACAATATCCGGTAGAACTTATTGTGGTGTTTTTATACAACTTGTGCGGGACTCTTATATCTGCCCCAGCATGCTTACTTGTTGAATCAAGCTTCAGTGTTTGGAGGCTAAAACTTGACATAACATTATTGGCGGTTATATTCTCAGTAAGAAAGTTCAAATCAAGTAAGCTATTATTGAAAGGAAGATATTGA 825 0.4036 MASSGRCYWYMNVVPLCAMVAVECFSVVSSVLFKAATQKGLSYYVFIAYSYAISTFILLLPFPFIFFTTRSSGLPTFKASLVGRIFLLGVIGFVFQLIGYKGLEFSSPTLASALSNLIPAFTYVLAILFRMEKATLKSSSTQAKIIGSIISIIGALVVTLYKGPVVLSASSSSSLLSSSSSQGDWVLGAFLLAASYTLPPLWYIVQTQVMEQYPVELIVVFLYNLCGTLISAPACLLVESSFSVWRLKLDITLLAVIFSVRKFKSSKLLLKGRY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03012 274 Pfam EamA-like transporter family 17 159 IPR000620 GO:0016020|GO:0016021
Aip06g03012 274 PANTHER WAT1-RELATED PROTEIN 15 261 IPR030184 GO:0016021|GO:0022857
Aip06g03012 274 PANTHER WAT1-RELATED PROTEIN 15 261 - -
Aip06g03012 274 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03012 Aip-Chr6 124565194 124571085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03012 8 259 Nodulin-like Gene Family AT5G40240 55.212 2.45e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03012 - - aip:107605316 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03012 06 124565194 124571085 Aip06g03012 06 124565194 124571085 ECH
Aip05g01533 05 25958420 25962045 Aip06g03012 06 124565194 124571085 ECH