Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03008 ATGGAGAGAAATTCTTTCTGGGTTGCCTTCATTGCATCCCTTTTCCTCCTAAGAATGGTTAATTGTGTTGATTATGAGGTCAAGAGCACAATGATACTCTTTCTTGCACAACTCTCTGGCAATGATAGTCATCAGAATTTCACTTTGAATTGGAAATTAGGCTCTGATCCCTGCATAGATCAATGGCAAGGTGTAGAGTGTGATACTAAAAACTCATCCATCAAGAATTTGCTTCTTGACAAGCTAAGCTTATCAGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCATCCCCTGGCTGCATCTCTCATTTATCTTAGTCTCGACGGCAACGGCGTCCACGGAGGCATCCCGGAAGAGATTGGAAGCTGCAAACAACTCACTCAACTACACTTAAGCGGAAACCAACTTTCTGGAACCCTTCCTAGTTCACTTTCCAAGTTAAACAATTTAAAGAGTCTTGATATATCTAACAACAAATTTTCGGGACAGTTACATCCTGATTTGGCTAGAATCTCAACGCTGAATATGTTCCTAGCACAGAATAATCAGCTCAGTGGAGAAATTCCGCCGTTTAATTTCTCTAATTTCGACCGGCTCGATGTCTCCTTCAACAATTTCAGTGGAGTTATTCCAGATATACATGGACATTTCACCTCTGAAAGCTTCCTCGGTAACCCTCAACTCTGTGGTGATCCATTACCAAAGAGTTGCACCGGCTCGCCGGTGCCTGCTAGCAAAGATTCCAAAGAACGGAAGGAATCGCCGGTGCCTGCAGCCGCTGCCGGGGACAATTCTGATGAAGAACCAAAGAAATCATCAAAGGGCCCTTCAAAAGAGCAGATTCTTATGTATTCAGGCTATGCGGCGATCGGAGCTTTAGTGATCCTTTTAATTGTCTGGAAGCTGTGCAGAAGAAAAAAGAAAGAAAAGAGAATTGAAGCATTGAATGAGAAAGTTGTAACTCAAGGTAGTGCTCAAAAAGCTAGCCATGTTTCAAGTGAATACAGAGCAGGGGTAAGCCGATCAGACTTCTCATTAACTTCCGAGAGCGGCATGGTTTCGCAATCACTCGTGGTTCTTTCGAATTCGAGGAATACTATGCATGAATTGAAATTAGAGGACTTGCTCAAGGCTCCGGCTGAATTGATTGGAAGAGGAAAGAATGGTAGCCTTTATAAGGTGGTTTTTGAAAATGGGACAACGGTGGTTGTGAAAAGGATCATCGATAGGTCTGTTCCCGGCCGCGATTTCAAGCAAAGAATGCAGATTTTGAGTCAAGTGAAGCACCCTTATGTGCTCTCACCTCTTGCTTTCTATTGCTCCAAGCAAGAGAAGCTTTTGGTCTATGAATATCAGCAAAATGGAAGTTTATTTAAGCTTCTACACGGTGCCCAAAAAGCCTTTGACTGGAGCAGCAGGCTTGGAGTTGCAGCTACGACCGCTGAGGCATTAGCTTTCATGCATCAAGAGCTTGGGCAACAAGGTATCTCACATGGCAACCTAAAATCATCCAACATTTTGCTAAACAAGAACATGGAGCCATGCATAAGTGAGTATGGTGTGATGGGTGGAGACGACGACCAACAACAACAACATAGTTCATCTTTTGTTAGTCCTTTCACTTCCATGTCATCATCGGATCACGCGGCCTTCAAGGCCGATGTCTATGGATTCGGCGTCATTCTGCTCGAACTACTCACCGGAAAGTTGGTAAAGAGCGAAGGGATGGAACTGACGGAGTGGGTTCAGTCTGTTGTGAGGGAAGAATGGACGGGTGAAGTGTTTGATAGGACTCTGATATCAGAGTATGCAAGTGAAGAAAGGATGGTGAATTTGCTTCAGGTGGCTATAAGGTGTGTTAATCGTTCCCCTGAGGCTAGGCCAAGTATCAACCAAGTCGCTCTAATCATTAACACTATAAAGGAGGAAGAAGAAAAGTCTTTGATTTATCAAGTGTGA 1962 0.4373 MERNSFWVAFIASLFLLRMVNCVDYEVKSTMILFLAQLSGNDSHQNFTLNWKLGSDPCIDQWQGVECDTKNSSIKNLLLDKLSLSGTLDVAMLCNLHPLAASLIYLSLDGNGVHGGIPEEIGSCKQLTQLHLSGNQLSGTLPSSLSKLNNLKSLDISNNKFSGQLHPDLARISTLNMFLAQNNQLSGEIPPFNFSNFDRLDVSFNNFSGVIPDIHGHFTSESFLGNPQLCGDPLPKSCTGSPVPASKDSKERKESPVPAAAAGDNSDEEPKKSSKGPSKEQILMYSGYAAIGALVILLIVWKLCRRKKKEKRIEALNEKVVTQGSAQKASHVSSEYRAGVSRSDFSLTSESGMVSQSLVVLSNSRNTMHELKLEDLLKAPAELIGRGKNGSLYKVVFENGTTVVVKRIIDRSVPGRDFKQRMQILSQVKHPYVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGAQKAFDWSSRLGVAATTAEALAFMHQELGQQGISHGNLKSSNILLNKNMEPCISEYGVMGGDDDQQQQHSSSFVSPFTSMSSSDHAAFKADVYGFGVILLELLTGKLVKSEGMELTEWVQSVVREEWTGEVFDRTLISEYASEERMVNLLQVAIRCVNRSPEARPSINQVALIINTIKEEEEKSLIYQV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03008 653 SUPERFAMILY L domain-like 48 224 - -
Aip06g03008 653 Gene3D Phosphorylase Kinase; domain 1 346 452 - -
Aip06g03008 653 Gene3D Ribonuclease Inhibitor 192 241 IPR032675 -
Aip06g03008 653 Pfam Leucine rich repeat N-terminal domain 34 68 IPR013210 -
Aip06g03008 653 SUPERFAMILY Protein kinase-like (PK-like) 381 635 IPR011009 -
Aip06g03008 653 PANTHER OS05G0588300 PROTEIN 5 651 - -
Aip06g03008 653 ProSiteProfiles Protein kinase domain profile. 378 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03008 653 Pfam Protein kinase domain 382 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03008 653 MobiDBLite consensus disorder prediction 235 278 - -
Aip06g03008 653 PANTHER OS10G0387400 PROTEIN 5 651 - -
Aip06g03008 653 Gene3D Transferase(Phosphotransferase) domain 1 454 652 - -
Aip06g03008 653 Gene3D Ribonuclease Inhibitor 28 191 IPR032675 -
Aip06g03008 653 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03008 Aip-Chr6 124478455 124481404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03008 51 642 Receptor kinase-like Gene Family AT1G68400 34.790 8.83e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip06g03008 Pkinase 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03008 - - aip:107605318 1221.45