Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02983 ATGGCTACTGCATCAACTACCCCATCATCAGTTCCAGCAATGCCGTCTCACATGAAAGCCTGGGCCTATACAGAACATGGGAAGACAACAACAGTTCTGAAGTTAAATCCAAATTTTCCTGTTCCTGAACCCAAGTCGAACCAGGTACTAATAAAGGTTGTTGCTGCAGCCATTAATCCCATAGATTATGTCAAGATTGAGGGACGTATGGTGTATGAGGATGCTGAACAAGTTCCATTTCCGATTGTTCCTGGCTATGATGTTGCCGGTGTGGTGGTGAAAGTAGGAAGTGGAGTGAAGAAGTTCAAAGAAGGGGATGAAGTGTATGGTATGGTGGAGGCAAAAGATGTTGGGTCTTTGGCTGAATACACAACTGCACAAGAGAATGGTTTGGATCACAAGCCTCCAAATTTGGGCTTCGCTGAAGCTGCTGCCATTCCTTTAGCAATTCAAACTGCTTATGGAGCTCTTCACAAGGTTGGCCTTTCTGCCGGCCAATCTATTCTTGTTTTGGGAGCTTCTGGCGGCGTTGGATCCTTTGTTGTTCAGGTTGCGAAACATGTTTTTGGTGCTTCCGTGGTGGCAGCTACAGCTAGCACTGGAAAACTGGAATTGCTGAAGAAGTTAGGAGTTGACATGCTAATTGATTATACAAAACAGAACTTTGAAGATCTTCCTGAAAAGTTCGATGTAGTCTATGATGCCGTAGGGCAGAGTGAAAGGGCATCGAAGGCTATGAAAGAAGGTGGCAAAATTGTAACAATAGTACCTCCTGGAGTTTCACCAGCAATGGTGTTCATACTCATTCCTGATGATGGAACAATGTTGCAAAAGCTAAGACCGTACTTGGAGAGTGGCAAGGTGGTGCCAGTACTTGACCCCAAGACTCCATTTCCATTTTCTCATACTGTTGAAGCACTCTCTTATTTGCAAACTCGTAGAGCAACGGGAAAAGTAGTCATTCATCCCATCCCTTGA 978 0.4468 MATASTTPSSVPAMPSHMKAWAYTEHGKTTTVLKLNPNFPVPEPKSNQVLIKVVAAAINPIDYVKIEGRMVYEDAEQVPFPIVPGYDVAGVVVKVGSGVKKFKEGDEVYGMVEAKDVGSLAEYTTAQENGLDHKPPNLGFAEAAAIPLAIQTAYGALHKVGLSAGQSILVLGASGGVGSFVVQVAKHVFGASVVAATASTGKLELLKKLGVDMLIDYTKQNFEDLPEKFDVVYDAVGQSERASKAMKEGGKIVTIVPPGVSPAMVFILIPDDGTMLQKLRPYLESGKVVPVLDPKTPFPFSHTVEALSYLQTRRATGKVVIHPIP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02983 325 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 165 186 IPR002364 GO:0008270|GO:0016491
Aip06g02983 325 Pfam Alcohol dehydrogenase GroES-like domain 47 113 IPR013154 -
Aip06g02983 325 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 11 325 - -
Aip06g02983 325 Gene3D - 157 272 - -
Aip06g02983 325 CDD MDR_like_2 18 321 - -
Aip06g02983 325 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 11 325 IPR044626 GO:0016628
Aip06g02983 325 Pfam Zinc-binding dehydrogenase 209 321 - -
Aip06g02983 325 Gene3D - 25 321 - -
Aip06g02983 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 138 264 IPR036291 -
Aip06g02983 325 SUPERFAMILY GroES-like 15 172 IPR011032 -
Aip06g02983 325 SMART PKS_ER_names_mod 28 321 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02983 Aip-Chr6 124019878 124025806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02983 14 140 Monolignol Biosynthesis Gene Families AT2G21730 26.357 2.08e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02983 K18980 - jre:108992834 375.17