Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02966 ATGGCCAACAAGTTTCTGCCATTAATAACAACAACAATCCTTACTATTCTTTCATCGCTATGTGGAATCCATTGCGAATATGATAGGTCCCTCAAGGGTGACATCATACATCGCTTATGCAGCTACACCAACATGACAGACCAATATTTATTTTTGAAATATCAAGAGAATTACTGGAATATGGTGAATGAGATGAAAAATGACATGGGTCGATCCAAGTTTTCGGTTAGGGAAGTTGGTGACCCACCATATCGCATATACGTGTTCTCACAATGTAGGTTTGATCTTTCTGCTTCTGAATGCGTGCACTGCTTCAAATCCCTTCAAAGCGTTTTTTCCAGTTGCATGCCTGCCAAGGGTGCCCGAACCTTTTCAAGTGATGGGTGTTTTATGCGCTATGATAATTATAGTTTTTTTCAAGAGAGCGTTACCCCTTATTATTTGAGGGGATGTAGTGATGCGAAAGCAAAAGATGAAAAAGGATTTGTTGGTTTGGCAGTAAATGTAATAAATAAAATGTCATTCGAGGCACCCAAAAAGGGAGGCTACACAGCTATAGAAGGACGACGTGATGGTTCTAATCTCGTCATCTATGGTGCGGCTACTTGTTGGAAAACATTGAGCCAGGATATGTGTTCTGCTTGCCTCTCAAATGCTGCTAGCACCGCCATATCATGTTTGCCATCAACGCAGGTCCATGCTATCAATACTGGATGCATTTTGCGTTATGCTGATTATGACTTCATTATTATTGATTTGAAAAACAAAGAAAGCGATATTTTGATGAAAAGCACAGCAATTATTCTTGCTGCAATTGCTGTTTGTTCAGTGCTTATTATAGTTGCACACTATGGGACTAAAAATGTTGACAAACTGTGGGGTATTCCAATTTTACGAACAGGACTAGAGATGACCCCAGGTAGAGTAAAATTAAGCTCATGGTTCATGCAGTTCGAGTACTCGACGTTAGAGAGAGCAACCAATGTTTTCAATGAATTCCATAAACTTGGTGAAGGGGGATATGGTGAAGTTTACAAGGGAACCTTACAAGATGGAAGAGAAATAGCGATAAAGCGTTTCTTTTTGAGTGGAAAGCAGGGAAAACAAGAAGTTTACAATGAAATTGATGTATATGGCAAAGCTCAACACAAGAATCTAGTTCGTTTCCTTGGCTGCTGCTTCACCTCCACAGAAAGCTATCTGGTTTTTGAATTCCTTGCAAACAAAAGCCTTAACTGCATCTTGTTTGACCCGGAGAAGAAGAAACAGTTGGATTGGCCAAAGAGGCATGGTATAATCCTTGGGGTAGCTGATGGATTGGAACATCTGCATAACAATTCTGAAGGGCCAATAATTCACAGAGACATCAAAGCCGGAAACATTTTATTAGACTTGAAATATAGACCAAAGATCTCTGATTTTGGCTTAGCAAAGTTGAAGTCCTATGACTGTACATCTATTGTAGGCACATTGGGGTATATGGCACCAGAATACCTTGCTGGTTGTTCCATAACAGAAAAAGTAGACGTTTACAGCTTTGGAATATTAGTGCTTGAAATTATCAGTGGAGTGGAAAATGCAAAATTTGAGTCTACTGAAGAAACATTTGAGACTCTTGTTTCCCATGCATGGAAGCATTTCAAATCAAACACCACGTCAAAAATTATTGATGAAAGCATGGAAAATCAAGATCTTGAAGAAATTACAAGAGTTATACATGTGGGACTTTTGTGCACACAAGAGTTGCCGTACCTGCGTCCCAGCATGACAGAGGTGGTAGCAATGCTTAGACAGAAGGATGTTGTAATGCCATTACCTTCCAAACCTCCATTCACTGTTGATTCTTTCGAATTTCCACAAGAAATAGAATCTAGTTGGGAATCGAAAGTTGTTGGTGGTGGGCCGTTTTCTTCGAGTCCTCAAGTAGTCTTGTTAGATATAAGACCGATCCACTTCGCCCAGTCTCATGATAGTATCGAAAAAGACGACAGCGAGGACGATTCAAATTATGTTACCGAATCCAGGTCGTCGAACGAGACTTCTTTCTGTGATAAGTATGTGCTGGAGATTCTCACTGGCGACGGTGTTCTATTTCTCCTGCTTCTCCCTTTGCACATTTCTCAATTGTCAGAAGTTTCAAGTTATTATCACACTTTGAAAATAAAATATTATATTCTATACAACATTAATATTCATTGCTAA 2202 0.3951 MANKFLPLITTTILTILSSLCGIHCEYDRSLKGDIIHRLCSYTNMTDQYLFLKYQENYWNMVNEMKNDMGRSKFSVREVGDPPYRIYVFSQCRFDLSASECVHCFKSLQSVFSSCMPAKGARTFSSDGCFMRYDNYSFFQESVTPYYLRGCSDAKAKDEKGFVGLAVNVINKMSFEAPKKGGYTAIEGRRDGSNLVIYGAATCWKTLSQDMCSACLSNAASTAISCLPSTQVHAINTGCILRYADYDFIIIDLKNKESDILMKSTAIILAAIAVCSVLIIVAHYGTKNVDKLWGIPILRTGLEMTPGRVKLSSWFMQFEYSTLERATNVFNEFHKLGEGGYGEVYKGTLQDGREIAIKRFFLSGKQGKQEVYNEIDVYGKAQHKNLVRFLGCCFTSTESYLVFEFLANKSLNCILFDPEKKKQLDWPKRHGIILGVADGLEHLHNNSEGPIIHRDIKAGNILLDLKYRPKISDFGLAKLKSYDCTSIVGTLGYMAPEYLAGCSITEKVDVYSFGILVLEIISGVENAKFESTEETFETLVSHAWKHFKSNTTSKIIDESMENQDLEEITRVIHVGLLCTQELPYLRPSMTEVVAMLRQKDVVMPLPSKPPFTVDSFEFPQEIESSWESKVVGGGPFSSSPQVVLLDIRPIHFAQSHDSIEKDDSEDDSNYVTESRSSNETSFCDKYVLEILTGDGVLFLLLLPLHISQLSEVSSYYHTLKIKYYILYNINIHC 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02966 733 Pfam Salt stress response/antifungal 52 136 IPR002902 -
Aip06g02966 733 Pfam Salt stress response/antifungal 158 246 IPR002902 -
Aip06g02966 733 Gene3D Transferase(Phosphotransferase) domain 1 406 603 - -
Aip06g02966 733 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 17 625 - -
Aip06g02966 733 ProSiteProfiles Protein kinase domain profile. 330 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02966 733 SUPERFAMILY Protein kinase-like (PK-like) 313 623 IPR011009 -
Aip06g02966 733 Gene3D Phosphorylase Kinase; domain 1 303 405 - -
Aip06g02966 733 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Aip06g02966 733 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Aip06g02966 733 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02966 733 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 17 625 - -
Aip06g02966 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Aip06g02966 733 ProSiteProfiles Gnk2-homologous domain profile. 144 248 IPR002902 -
Aip06g02966 733 SMART serkin_6 330 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02966 733 Gene3D - 32 138 IPR038408 -
Aip06g02966 733 Gene3D - 144 248 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02966 Aip-Chr6 123315909 123321925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02966 34 616 Receptor kinase-like Gene Family AT4G28670 45.588 7.70e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip06g02966 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02966 - - aip:107614699 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02966 06 123315909 123321925 Aip06g02966 06 123315909 123321925 ECH