Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02960 ATGCAACCTGAGCATTACTTCTCGGAGAAGTCCTCGTTCCCCGTTGCCGTCGATGAGGACGACAAAGCCACCGAGTTCCGTCCGCTCTCGGCAGCGCGGCCACACATGCTTACCTTCCACCTGGCATGGCTGAACCTCTTCTCCTGCTTCTTCTCCACCTTTTCCATTCCCCCACTCCTTCCGATCATCCGTGAAGACCTCAAACTCACCGCCGCGGAAATAGGCGCCGCTGGCACCGCCTCCTTTGCGGGCTCCATCTTCTCCCGCCTCCTCATGGGACCCACCTGTGACCTCGTCGGCCCCCGCATAGCCTCTGGCACGCTCTCCCTCCTCACCGCCCCAATCATCCTCGCTACCTCCCTGGCCTCCACACCCACCTCCTTCATCGCCGTCCGCTTCCTCGTCGGTTTCTGCCTCGCTAATTTTGTCTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCGGCAACGTCGTCGGCCTCGCCAACGGCGTTGTCGCAGGCTGGGCCAACGTCGGCTCTGGCGTGACCCAACTCGTCATGCCCGTCGTCTACTCCCTCTTCATCTCACTATTCAACCTCCCTTCCTCCACCGCATGGCGCTTATCATTCATAATCCCGGCAATTTTCCAAGCCACCACCGGAACCTTGGTTTTGTTATACGGTCAAGATCTCCCTTCTAGTAACCACAACACCAAGAGAGGTAGTACTAATCGAAAGGAGAGTGTATTTGTTGTTGTGGTGCGTGGGTTGTCGAATTACAGAGGATGGGTTCTGGGACTGCTGTATGCGTCGTCGTTTGGGATGGAGCTTACAATGGACAACATAATAGCGGAGTATTTCTATGACAGGTTCGGGGTGAATGTTCAGACGGCGGGGACCATAGCGGCGTGTTTTGGGATGGCGAATGTGTTTTCGAGGCCAATGGGTGGAGTGATGTCTGACAGGATGGGAAAGAGGTTCGGGATGAGAGGGAGGCTTTGGGGGGTGTGGGCGGTTCAGACGGTGGCCGGTTTGCTGTGTGTGTTGCTAGGCCGAGTTGACTCGCTTTGGAGCTCGGTGCTTGTTATGTGCTGCTTTTCAGTGTTTGTTCAAGCCGCTTCTGGCCTCATCTTTGGCGTGGTTCCTTTCGTTTCCAAGAGGTTAGCTGCTATATTCTCGCTTCATCAAATTTATTTTTTTGTTTTTCAATTGAATCTTTAA 1200 0.5467 MQPEHYFSEKSSFPVAVDEDDKATEFRPLSAARPHMLTFHLAWLNLFSCFFSTFSIPPLLPIIREDLKLTAAEIGAAGTASFAGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPIILATSLASTPTSFIAVRFLVGFCLANFVSSQFWMSSMFSGNVVGLANGVVAGWANVGSGVTQLVMPVVYSLFISLFNLPSSTAWRLSFIIPAIFQATTGTLVLLYGQDLPSSNHNTKRGSTNRKESVFVVVVRGLSNYRGWVLGLLYASSFGMELTMDNIIAEYFYDRFGVNVQTAGTIAACFGMANVFSRPMGGVMSDRMGKRFGMRGRLWGVWAVQTVAGLLCVLLGRVDSLWSSVLVMCCFSVFVQAASGLIFGVVPFVSKRLAAIFSLHQIYFFVFQLNL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02960 399 CDD MFS_NRT2_like 39 384 IPR044772 GO:0015112
Aip06g02960 399 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 8 385 - -
Aip06g02960 399 Gene3D MFS general substrate transporter like domains 243 385 IPR036259 -
Aip06g02960 399 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 399 IPR020846 GO:0022857
Aip06g02960 399 Gene3D MFS general substrate transporter like domains 32 232 IPR036259 -
Aip06g02960 399 SUPERFAMILY MFS general substrate transporter 19 379 IPR036259 -
Aip06g02960 399 Pfam Major Facilitator Superfamily 43 380 IPR011701 GO:0022857|GO:0055085
Aip06g02960 399 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 385 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02960 Aip-Chr6 123226163 123227702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02960 1 380 Inorganic Solute Cotransporters AT5G14570 62.250 4.79e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02960 K02575 - pvy:116145243 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02960 06 123226163 123227702 Aip06g02960 06 123226163 123227702 ECH