Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02947 ATGGGAGGATGTTGCAGCCATGAGCTTGGTATTCGAGAGAAGGTTGAGAGCGAGTTGGGAGATGAACATGAGCTTGATTATGAGGGCAATGATATAGAATATGGTTATGGTGGTGAAATCATAAGGCTCAAAGGGTGCTCTAGGTTTGTATCAATGTATTGCCAACAGGGTAAGAAAGGTGTCAATCAAGATTCTATGACTGTTTGGGAGGACTATACCGGAGAAAAAGACATGATATTCTGTGGTGTTTTTGATGGGCATGGTCCTCTAGGGCACAAAGTATCGCAATATATCCGCGACAATCTACCTTCGAAGCTGTCTGCAGCAATCAAATTGGCACAACAAAAGGCCAACAACTATTATGATGATAGTGATGCAGATACAAGCACGTTTGATGATTCTAACCAGAACATGTCCCTTGCTTCATGGGAGGGATGCTTTATCAAGACATTCAAGGAAATGGATGATTACCTTGCCAAGGACATTAATACCGACAGCTATTGCAGCGGTTGCACCGCCGTTACTGTCATCAGACAGGGTGATCAGCTTATAATCGGAAATTTGGGCGATTCTCGCGCGATTCTTTGTACTAGAGAGAGAGATCAACGTGTTCCTATTCAACTTACCGTGGATTTGAAACCTGATCTTCCAAGTGAAGCTACAAGGATCATGAGCTGTGAAGGCAGAGTTTTCGCGGCAGAGGAAGAACCCGACGTGTGCCGAATATGGATGCCTGATGATGACTGCCCTGGATTAGCCATGTCCAGATCCTTCGGAGACTTTTGCCTCAAAGATTATGGCCTCATCTCAATTCCTGATGTATTTTACAGGAAACTTTCCAAGCAAGATGAATTTGTGGTCTTGGCAAGTGATGGGGTATGGGATGTGCTGAGTAACAATGAAGTTATCAACATAGTTGCTTCAGCACCAAGCAGAAGCGTAGCAGCCAAATTGCTTGTAAAAAGAGCCGTTCGAGCATGGAGATACCGGTATCCCGGCTCCAAGGTAGATGATTGCGCAGTTATATGCTTGTTCCTGGACGGCGAGCAGCCGGTGTTATCCCACTCGCAGTCCAAAAGGGTTGGCAAACATCTCAGCAAACACCCTCATCGCAACCGAACGATGAGCAACGAAGACAACGAGACAGTGGCCGGAAAAGTGGGGGTAGAGCTGAATGTCAATGAAGAATGGAAGGCTCTTGGAGGGTTAGCTAGAGCCAACTCCTTATCAAAACTTCCAAGGCTTACAAGAGACTTGAGTAGAAGGCAAGTATCAACTAGGTTCATTCAAGGGAGCTGA 1299 0.4565 MGGCCSHELGIREKVESELGDEHELDYEGNDIEYGYGGEIIRLKGCSRFVSMYCQQGKKGVNQDSMTVWEDYTGEKDMIFCGVFDGHGPLGHKVSQYIRDNLPSKLSAAIKLAQQKANNYYDDSDADTSTFDDSNQNMSLASWEGCFIKTFKEMDDYLAKDINTDSYCSGCTAVTVIRQGDQLIIGNLGDSRAILCTRERDQRVPIQLTVDLKPDLPSEATRIMSCEGRVFAAEEEPDVCRIWMPDDDCPGLAMSRSFGDFCLKDYGLISIPDVFYRKLSKQDEFVVLASDGVWDVLSNNEVINIVASAPSRSVAAKLLVKRAVRAWRYRYPGSKVDDCAVICLFLDGEQPVLSHSQSKRVGKHLSKHPHRNRTMSNEDNETVAGKVGVELNVNEEWKALGGLARANSLSKLPRLTRDLSRRQVSTRFIQGS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02947 432 Gene3D - 44 348 IPR036457 -
Aip06g02947 432 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Aip06g02947 432 CDD PP2Cc 48 346 IPR001932 -
Aip06g02947 432 ProSiteProfiles PPM-type phosphatase domain profile. 49 346 IPR001932 -
Aip06g02947 432 PANTHER ALPHABET, ISOFORM E-RELATED 1 405 - -
Aip06g02947 432 MobiDBLite consensus disorder prediction 357 376 - -
Aip06g02947 432 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Aip06g02947 432 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 405 - -
Aip06g02947 432 SMART PP2C_4 39 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02947 Aip-Chr6 122907851 122911686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02947 1 378 PP2C-type Phosphatase Gene Family AT5G01700 50.265 1.26e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02947 - - gmx:100783603 668.307