Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02910 ATGTACGCTATTGGCGGGAGTGCTAACCCAACCATTATAAGCCAAGGGAACAGGTTTCTGGCACCGGATAACAGGTTCAGCAAGGAGGTGACGAAGCACGAGATTGCGGCACAGAAGGAATGGAAGAACTGGAACTGGAGATCGGAGGGGGACATGTTCTTGAATGGAGCATTCTTCCGAGAATCTGGTGAAGGTGCTCTTTATACCTATGCTAGGGCATTGAGTCTCAGTGCAAGGCCATCTTCTTTGGTTGAATCAATGACCACCACTGCTGGTGCACTCAACTGTAAGAAGGGTAACCGCTGCTGA 309 0.4984 MYAIGGSANPTIISQGNRFLAPDNRFSKEVTKHEIAAQKEWKNWNWRSEGDMFLNGAFFRESGEGALYTYARALSLSARPSSLVESMTTTAGALNCKKGNRC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02910 102 SUPERFAMILY Pectin lyase-like 1 100 IPR011050 -
Aip06g02910 102 PANTHER PECTATE LYASE 1 99 - -
Aip06g02910 102 Gene3D - 1 95 IPR012334 -
Aip06g02910 102 PRINTS Pollen allergen Amb family signature 2 21 IPR018082 -
Aip06g02910 102 PRINTS Pollen allergen Amb family signature 73 96 IPR018082 -
Aip06g02910 102 PRINTS Pollen allergen Amb family signature 44 68 IPR018082 -
Aip06g02910 102 PANTHER PECTATE LYASE 18-RELATED 1 99 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02910 Aip-Chr6 122292590 122292898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02910 1 102 Polysaccharide Lyase AT4G24780 71.569 1.12e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02910 K01728 - gmx:100794814 169.859