Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02902 ATGTGCTTTGGCACATTAGAAGATGCGCGTACATATTATTACCGATATGCGGCTAGGACTGGTTTTGTCGTCAAAATAAGAACCACTGGTTGGGAGACTAGAAACGGTCAGAGAGTGGTTATTAATCAGGCTTTGCATTGTAACATAGATGGATACCGCACATCCCGTGTAAAGGCACCCAAGAGAAGGAAAACGGTGGCCTCAACAAACTGCAAAGTCCGTTGCTATTTGGCATTAGATAAGATGACAGAACAGTGGAGAATTTCTCGAGTAGAGGTATCCCACTCACACCCGCTTAATCTGAAGCTATCTGGAATGTTTTCAGCAAACCATCagctaaTAGTATCCTTACAATACATTCTATCCCGATGGAGTAAGAATGTTAGTTGGAAACACACATACATCAGGAGTAGCATTGACATGGACCGTTCTGATGAAAGCATGACCATTTTTAGGGAATTGTGTTCTGATTTTTACAACGTCGCTCAGGATTTCGTAGCTACTCCGAGGTTGCTGCTATATTGCATGATGTCATGGACAGTGCTCGGCACAAGCTCAAAGAACACAAGGAATCCGAGCATCAAGCTGTACATGTACCAAGTGCAATTAAGTCACATACGCGTGATGAGTGTTCCGTTGGCATGGATGAGCTACAGGGCCCACGTCGTGTTCCTACGCGAGGTTGTCCAATGTCCACCAGACTTGGGACAGATCTAG 717 0.4449 MCFGTLEDARTYYYRYAARTGFVVKIRTTGWETRNGQRVVINQALHCNIDGYRTSRVKAPKRRKTVASTNCKVRCYLALDKMTEQWRISRVEVSHSHPLNLKLSGMFSANHQLIVSLQYILSRWSKNVSWKHTYIRSSIDMDRSDESMTIFRELCSDFYNVAQDFVATPRLLLYCMMSWTVLGTSSKNTRNPSIKLYMYQVQLSHIRVMSVPLAWMSYRAHVVFLREVVQCPPDLGQI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02902 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 116 - -
Aip06g02902 238 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Aip06g02902 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02902 Aip-Chr6 122178180 122180428 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02902 FAR1 5.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02902 - - ahf:112775207 203.756