Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02893 ATGGGGTTCTTGACATTCTTGAAGAGCAAGAAGAAAAAGATTGATGAAATGATGTTGAGGAATCGAATCAACCGTATCGAGCGTGTAGCTAGGCAGCTAGTTGAGCATGGAACACAAGAGTCTTCACCTGCAGCTAGTTTCAGTGTTTCTGCTCCCCCGCCTGGTAGCGAAGTAGAACAAGATGGCTCGGCCTCAGTTACACATGAACAACAACAACCAAAGCGTCAACAAGGATCAATGAAGGAGCACTTTCCAACAAATCCACAACCCGTTCCGCTTCCATGTCCTCCTCCTCAGCATGCTTCTGGATCTTCGCTGCTTTCGCATAGCGCTTCGCTTCGATACTTCCTTTACGACGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTGCTGATGATTCTTCAAGGAAGCTCCAAGCTACTGTCACCCGCCTTCATCCTTCAACTCAGGGCTTGAAGGAATTCATTAATGAAGTCAATACTCTTGCATCTTTGCAACATCCAAACATTTGTAGGTTGCTTGGATTTCATGCACGTGACAGCTCAGAACCGAGGATGTTGGTGTATGAAAGGCTACACCTTGGAAGCTTGGATCGCTTGCTTTTTTACGGTACATCTGATTACCCAACTCTCGATTGGAATTCAAGATTGAAAATTGCCATTTGTGCTGCACAAGGTCTTACTTTCTTGCATGATGAAGGGCCCTTCCAGGTTGAAAAGGATTTCAGTGCAAAGCTTTCAGGGTATGGTTGCGTAGTCGGGCGAGTTTCAGAGGAAGCTATTAGAAACATGTCAATGGAAACATTCGAAAGAGGAATACTTACTCCGAAGAGCAATGTATGGAGTTTTGGAATCATTCTTCTGGAGCTACTTACCGGTATAAGGAATGTGGATAGCCGCCATCCAAATGTAGACAAGAACATAGTCAAGTGGAGCTGGCCATTCCTAAACGATGAATTCCGACTATCCATGATCATGGATCCTAAGCTGAAAGGCCACTATCCTCTAAGAGCAGCGAGGATGTTGGCTGACGTTGCGCACCGATGTCTCCAGAAGGAGCCATCGATACGGCCGACCATGCGAACTGTTGTTAAGCATCTTAAGATGATACAAGAGATGAAGTTCTCACCCCAAGAGCTAGTAACAATCCCTCTTGGAAAAAGTGTCCCTCTACCGCCACCACCGGAAGCTAGGCCTAGATTGAGTGTCTTTCCGCCATCACAGCCGACAAGTAAGCCTATACTGAGTTTCAATTCGTCATCTCCATCCGATGCCCCCAAGCAACATGTTTCGCCTCCTAAATGGTCTGACGTGCCCCCCACGCTTTCCACACACCCTTGGCCTTCCATACAATTTATGGAGAAGGTTGTTAGGCAAGAAACCAGGCATGGCCAATCATCATCCTAA 1554 0.4138 MGFLTFLKSKKKKIDEMMLRNRINRIERVARQLVEHGTQESSPAASFSVSAPPPGSEVEQDGSASVTHEQQQPKRQQGSMKEHFPTNPQPVPLPCPPPQHASGSSLLSHSASLRYFLYDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFADDSSRKLQATVTRLHPSTQGLKEFINEVNTLASLQHPNICRLLGFHARDSSEPRMLVYERLHLGSLDRLLFYGTSDYPTLDWNSRLKIAICAAQGLTFLHDEGPFQVEKDFSAKLSGYGCVVGRVSEEAIRNMSMETFERGILTPKSNVWSFGIILLELLTGIRNVDSRHPNVDKNIVKWSWPFLNDEFRLSMIMDPKLKGHYPLRAARMLADVAHRCLQKEPSIRPTMRTVVKHLKMIQEMKFSPQELVTIPLGKSVPLPPPPEARPRLSVFPPSQPTSKPILSFNSSSPSDAPKQHVSPPKWSDVPPTLSTHPWPSIQFMEKVVRQETRHGQSSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02893 517 MobiDBLite consensus disorder prediction 453 476 - -
Aip06g02893 517 MobiDBLite consensus disorder prediction 436 451 - -
Aip06g02893 517 Pfam Protein tyrosine and serine/threonine kinase 308 416 IPR001245 GO:0004672|GO:0006468
Aip06g02893 517 Pfam Protein tyrosine and serine/threonine kinase 189 282 IPR001245 GO:0004672|GO:0006468
Aip06g02893 517 ProSiteProfiles Protein kinase domain profile. 118 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02893 517 MobiDBLite consensus disorder prediction 60 84 - -
Aip06g02893 517 MobiDBLite consensus disorder prediction 28 106 - -
Aip06g02893 517 Coils Coil 118 120 - -
Aip06g02893 517 SUPERFAMILY Protein kinase-like (PK-like) 195 436 IPR011009 -
Aip06g02893 517 MobiDBLite consensus disorder prediction 435 517 - -
Aip06g02893 517 MobiDBLite consensus disorder prediction 35 49 - -
Aip06g02893 517 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 178 516 - -
Aip06g02893 517 Gene3D Phosphorylase Kinase; domain 1 180 239 - -
Aip06g02893 517 Gene3D Transferase(Phosphotransferase) domain 1 242 429 - -
Aip06g02893 517 PANTHER OS01G0588500 PROTEIN-RELATED 178 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02893 Aip-Chr6 121937676 121941787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02893 199 433 Glycoside Hydrolase AT3G07070 35.409 3.92e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Aip06g02893 PK_Tyr_Ser-Thr 2.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02893 - - adu:107494894 533.872