Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02890 atgctcacgcatcaCTCAGCAAGGGATCCTCTCTTCGCTCACCATTGTCGAGAAGGAGAACTCATTCTTCTAGCGGAGGAGATAACTCAAATCAAAACTTCAAGCAGCAATGAGACTGTTGGAACAATCAGGATTTTGGGAACTCCAACTGAGGAGCAATGGCCGGGAGTTACTTTGCTTCGTGATTGGCATACCTACCCAAAGTGGGAACCTCAGAACTTGGCGAGGACTGTGCCAACTTTGGGACCTGATGGAGTAGACCTTCTCACGAAAATGCTCAAGTATAATCCTGCTGAGAGAATCTCTGCCAAGGCAGCACTTGACCATCCTTACTTTGACAGTCTTGACAAATTTGACCAAACGAGCTCTTCCTCATTTCCCGTGTCTCTTCCCCGCACCTCCACGCCCATCCCCTCCAAATGCTCTATCGGTAGCGCGTCTCAGCCTTGCACCGCCGTCTTACCTTGCGCCGCCGTCGCACCGAACCTCCATTGCACTGAACTTCCATCGCCGCGAAACTCCGTCACACCCTTTCCCGGCTCTTCTCTGTGTGTTGCTGGTTCCCTTTCGAACCTTAATATGCATTTCTCCGCTACCGTCTTCGTCGCCTCCGTCGCCTCCGTTCTCATCCTCTTCACCTTCTCCTGCGTTCACTCTTTCTACCTTCCCGGTGTCGCCCCTCGAGATTTTCAAACCAAATCACAAATGCATTTCTCGCTCGTGTGTTGCTTAGTTGATGTGTTTTTCTCTTCGATCTCGCCTCAGCCGTGCAGAAATTTGATGTGGAGACGAGATGTTGCTTTCGCGGGATATGAGGTCGTAATGCAAATGGATGTTTCTGCTGAAAAGATGATATTTGGTGTGGCTGGGATTGATCCTGGAAGAAGAGCAGAGCTAATCAAGATGCTACTGGATACACAAGCTGTTAAGACAATCCTTCTTAAAATTCCTTCCCTTGGTAGACAGAATGTTGCATCAATATTGATCTTCAGCCAGTCGTTTGGTGGCACTCTCCATCTCACTGATTGGGAGACAAAAGGAGAAAAATTGAAGAAGATGGGGTTGGGAGTTCCTGCTCTTCCATTTACCTTTGTGGCTCACCTTCTAGCGGTGGCTGCTATTGTCATGGTCTTGCTTTGGAACATACATTTCAGAGGTGGCTTAGCTTGGGAAGCTACCAACAAAAATCTCATATTTAATTTAGTGGAGTTCCACCCGATGCATTCTGTGAAACTGGTCAGCTGTGGGGCAGTCCTTTGTATGATTGGAATGCCATGGAGAAAGAAGGATACTCGTGGTGGATATGCCGCATACGCCGTGCACAGAATTTATATGATGAATTTAGGATCGATCACTTATAAACCTTGCGTCAACACTTCATTAAGAGAACTACAAGCATCAAATTCAGAGACTTGTTCCACAGAGAAAACTGCTAGATGTAACTGCACTCCTGAATCTAGTCTTCCATGGATTGTCAGATATCGCCTTGCTATTCTATTTTTTGTCTCCTTAGCTTTATTGCTTCTTGTATTGGTACTGATTCTTTATGCTGTTATCAAATTTGCCCGACAAGGAATCTGCAGCAAAAGGAAGCCCGATTGA 1602 0.4613 MLTHHSARDPLFAHHCREGELILLAEEITQIKTSSSNETVGTIRILGTPTEEQWPGVTLLRDWHTYPKWEPQNLARTVPTLGPDGVDLLTKMLKYNPAERISAKAALDHPYFDSLDKFDQTSSSSFPVSLPRTSTPIPSKCSIGSASQPCTAVLPCAAVAPNLHCTELPSPRNSVTPFPGSSLCVAGSLSNLNMHFSATVFVASVASVLILFTFSCVHSFYLPGVAPRDFQTKSQMHFSLVCCLVDVFFSSISPQPCRNLMWRRDVAFAGYEVVMQMDVSAEKMIFGVAGIDPGRRAELIKMLLDTQAVKTILLKIPSLGRQNVASILIFSQSFGGTLHLTDWETKGEKLKKMGLGVPALPFTFVAHLLAVAAIVMVLLWNIHFRGGLAWEATNKNLIFNLVEFHPMHSVKLVSCGAVLCMIGMPWRKKDTRGGYAAYAVHRIYMMNLGSITYKPCVNTSLRELQASNSETCSTEKTARCNCTPESSLPWIVRYRLAILFFVSLALLLLVLVLILYAVIKFARQGICSKRKPD 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02890 533 Gene3D - 356 449 - -
Aip06g02890 533 PANTHER CYCLIN-DEPENDENT KINASE B1-2 40 117 - -
Aip06g02890 533 PANTHER CELL DIVISION PROTEIN KINASE 40 117 - -
Aip06g02890 533 SUPERFAMILY Protein kinase-like (PK-like) 39 116 IPR011009 -
Aip06g02890 533 Gene3D Transferase(Phosphotransferase) domain 1 10 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02890 Aip-Chr6 121879259 121892692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02890 34 117 Core Cell Cycle Gene Families AT2G38620 73.810 2.80e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02890 K07760 - ahf:112755150 365.925