Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02881 ATGGTTAGTGAAGACCAAAAACGAAGCCCCAGAAACCAGAAGTACCCTGCAACTGAGGGAAATGGCCAAAGCCAAAACCTTAACGATGCCGTTTTCAGTCCGCGATTCAAATCTGCGGCAGCTATGGCCGGCTGGGACGAAGAGGCACTGCTTCTCGCAAGCCTCGTCGTTGAAGACACACCCGATAGAGATTTCAAACACAAGAAGCGCTCTGTCTTGAACTCCAAGACTCCACCCACCAATTCAAGAAGGAAACGCAGAGCACAGAGTTCTCCAGAATCGATACGAGTGGCTGTTCTTGATCTTGACGAAGAAGACACTCCAAGAAAAGACAGTAAAGAAAAGACTAAAGAAAAGAAGGCCACTGTAAACGAAGAGAGTAAAGAAGGAGGGAAGGAATCCACTAAGGAGAAATCCGGTGTTGCTGCACTTCCCTGCATTGATAAGCTCAGAGACGAGCTTTCTTGCGCGATTTGTTTGGAGATATGCTTTGAGCCAAGTACCACCCCTTGTGGTCACAGCTTTTGTAAAAAGTGCCTTCGATCTGCTGCAGACAAATGTGGCAAAAAATGCCCAAAATGCAGGCAATTAATAGGCAATGGAAGATCATGCACTGTGAACACTGTTCTCTGGAATACAATACAGCTCCTGTTTCCCCAAGAAGTTGAGGCAAGGAAAGCGGCCGGCGCCATAAATAGCCGGCAACAATCTAAGTGCCTGAGCCCAGAAGCAGCATTTTACAACAATCTAAGGAATGATGAAAGCACAACAACCAGAGTTGGTGTGAGTACAAGGAGAAGCGGCGGTAGGGCTGCCGCAATAACTGATCAGGAAGCAAGGCGTCTCCAAGGTGTGAGATCAAGAAGAGGGATTACTCCTGCTACACAAACTGAGGATGCAGCAATTGCCCTGAGGCTGCAGAGAGAGGAGTTTATGCATGCCTTTAGGGGAACACAGGAACAACACCATTCCAGCAGATCCTCATCTGTGGATTTAGCTAGAGAAAATTTGAGGGCAATGGCATCTAGAGCCATGACTCTTCGCATTAGAGATCGAAGATTTTGA 1065 0.4732 MVSEDQKRSPRNQKYPATEGNGQSQNLNDAVFSPRFKSAAAMAGWDEEALLLASLVVEDTPDRDFKHKKRSVLNSKTPPTNSRRKRRAQSSPESIRVAVLDLDEEDTPRKDSKEKTKEKKATVNEESKEGGKESTKEKSGVAALPCIDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLIGNGRSCTVNTVLWNTIQLLFPQEVEARKAAGAINSRQQSKCLSPEAAFYNNLRNDESTTTRVGVSTRRSGGRAAAITDQEARRLQGVRSRRGITPATQTEDAAIALRLQREEFMHAFRGTQEQHHSSRSSSVDLARENLRAMASRAMTLRIRDRRF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02881 354 MobiDBLite consensus disorder prediction 59 136 - -
Aip06g02881 354 Pfam Zinc finger, C3HC4 type (RING finger) 156 194 IPR018957 GO:0046872
Aip06g02881 354 MobiDBLite consensus disorder prediction 98 136 - -
Aip06g02881 354 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Aip06g02881 354 ProSiteProfiles Zinc finger RING-type profile. 156 195 IPR001841 -
Aip06g02881 354 PANTHER UNCHARACTERIZED 26 236 - -
Aip06g02881 354 PANTHER UNCHARACTERIZED 256 352 - -
Aip06g02881 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 225 IPR013083 -
Aip06g02881 354 SUPERFAMILY RING/U-box 148 219 - -
Aip06g02881 354 MobiDBLite consensus disorder prediction 13 29 - -
Aip06g02881 354 PANTHER - 256 352 - -
Aip06g02881 354 PANTHER - 26 236 - -
Aip06g02881 354 SMART ring_2 156 194 IPR001841 -
Aip06g02881 354 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02881 148 198 C3H Transcription Factor Family AT1G74990 39.623 3.36e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02881 - - gmx:102666585 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02881 06 121540226 121542073 Aip06g02881 06 121540226 121542073 ECH