Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02873 ATGTCATCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAATTATACAAGTCCCTTCAGAAAAGAGAAGTTCAGCTTATATTGGCGAATCCGGGGCCAGTTGTAATAGAGAAGCTCCATGCATCCAAGCTTACCGATCTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGTTAAATAA 222 0.4009 MSSVTDIDTSGIHAFEELYKSLQKREVQLILANPGPVVIEKLHASKLTDLIGEDKIFLTVADAVATFGPKGVK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02873 73 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 72 - -
Aip06g02873 73 CDD STAS_SulP_like_sulfate_transporter 1 60 - -
Aip06g02873 73 Pfam STAS domain 1 63 IPR002645 -
Aip06g02873 73 Gene3D STAS domain 1 68 IPR036513 -
Aip06g02873 73 ProSiteProfiles STAS domain profile. 1 67 IPR002645 -
Aip06g02873 73 PANTHER SULFATE TRANSPORTER 1 72 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip06g02873 73 SUPERFAMILY SpoIIaa-like 1 68 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02873 Aip-Chr6 121416596 121417004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02873 1 70 Inorganic Solute Cotransporters AT1G22150 74.286 2.60e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02873 K17470 - gmx:100806204 130.568