Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02859 ATGAGGAATTTTCACCTCTATTTTGTGGCTCTTTCTTTGTTCATGTTCACGTTCATCTCTATCAGCCATGAGCTTCAAGAAGCTCAAACCCAAGTCTTGTTTCAGATAAGGAAGTACCTTGAGTACCCTACCTCTTTAGAGATTTGGGGAAATTACGACAATGACCTTTGTAACCTTCCTTCATCTTCCCACACAAGCATTAAGTGTGATGGCAATTCAGTAACTGAGCTCAAAATCGTTGGGGACAAACCTAATGTGAGGGTAGACAAAAACAACATCAATGGATTTGCAGTTTCTAATTTAACACTATCCCCAAAGTTTTCTGTTCATTCTTTTGTCACCACATTGACAAGGTTAACAAGCTTAAGGGTCCTTAGCTTGGTGTCCTTAGGGATTTGGGGTCCACTTCCTAATAAGATTCATAGGTTATCTAATCTTCAAGTTTTGGACTTAAGCTCAAATTTCTTGTTTGGTTCTGTCCCTTCAAGAATGGCAACAATGGTTAATCTTCATACACTAGCACTTAATGGAAATTACTTTAATGACACCATACCCAATTGGTTTGACTCATTGTCTAATCTTAATGTGTTGAGTTTGAAGAACAACCAGTTAATTGGTTCATTCCCTTCCTCAATATGCAAAATTAAGTCCCTTAATGATATTTCCTTGTCCCAAAATGAGTTATCTGGTGAACTACCTGATCTAAGTGCTCTCACTTCCCTTCATGTCTTGGATTTAAGAGAGAATCATTTGGATTCTAAGTTACCATTGATGCCAAAAACAGTGGTTACAGTTCTTCTAAGCAAAAACTCATTCTCAGGTGAGATACCTAGTGAGTTTGGTGAACTGGAACGGCTTCAACATCTTGATCTTTCGTCAAATGATCTTAGTAAGACACCTCCAAATACATTGTTCTCTTTGCCAAACATAAGTTACTTGAATTTGGCGAGCAATGCACTCAGCGGTTCCCTCCCCAACAAACTAAGGTGTGGAAATAAACTTGGGTTTGTGGATATTTCTAATAACAAGCTAAATGGTGCACTTCCTTCTTGCTTGGCCGGCACGTCTGATCGACGAGTTGTTAGATACGGTGGAAACTGTTTGTCTGCTGATTCTCAGCCTCAGCAGAGAGGGTCTTATTGTAATTCAGGATTGAAGAAGTTCTCGGCATGGGAAATTGCTGTGGTGGTTGGTATCATTTTTGTAGTAGTTCCTGTGATTTTAGCTTCCGGAGTTTTACTTTATAGACAAGGTTACTTAAGGGAAACATATGAGAATGAAGTGTTCCCAAAAGTTGTCCAAGATTCCTCAACAACAGGGGTTTCCTCTGAATTCCTTGCCAGTGCCAGATTCATTTCACAGACATTGAAGCTAGGGACGCAAGCGACTTCGTTTTATAGACAATTTTCAACTGAAGAGTTGAAGGACGTCACCAAAAATTTTGACTTGTCAACTTATATTGGCGAAGGTTCCATAGGGAAGCTCTACAAAGCTAAACTGGAGAATGGATCCTATACAGTGATACGATCTGTTGCTTTGTCGAAGAAATGCTCAATTCAAAACCTCAAAATTCGGTTGGATTTACTCTCAAAACTTCAACATCCAAACTTGGTTAGCCTATTGGGTCACAGCATTGATGGTGGTGGACAAGATGACTCTAGTATTCCCAAACTCTATCTTGTATACGAGTATGTGCCAAATGGGGACTATCGCAGCCGTCTATCAGAATTTTCACCAGAGAAGGCATTAAAGTGGTCTGATAGATTGGCAATTCTGATTGGAGTTGCCAAGGCAGTCCATCATTTACATACTAGTGTCATACCTGGTTGTTTCGGAAACAATTTAAAGACGAACAATATTTTACTTGATGAGCATGACATTCCAAAACTAAGTGACTATGGCATGTCCATCATTGCTGAAGAGATTGCAAAGACTGAGGCAAAGGAAGATAATCCAGAATTAGATGACGATGTTTATAACTTCGGATTCATACTGTTTGAATCACTTGTTGGACCTGTCGCAAGCGGAAAAGGGGAAGCATTTTTTCTTAATGAAAAGGCATCCTTTGATAGTCATGATGGTAGAAGAAGAATTGTAGATCCGACGGTGTTGACCACTTGCAATCAAGAGTCACTATCAATTGCAATATCCATCACAAGCAAATGCATATCCGCAGAATCCTCATCACGTCCTTCTTTTGAAGATGTTCTATGGAACCTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGAAGCAGAGCAATGA 2265 0.3974 MRNFHLYFVALSLFMFTFISISHELQEAQTQVLFQIRKYLEYPTSLEIWGNYDNDLCNLPSSSHTSIKCDGNSVTELKIVGDKPNVRVDKNNINGFAVSNLTLSPKFSVHSFVTTLTRLTSLRVLSLVSLGIWGPLPNKIHRLSNLQVLDLSSNFLFGSVPSRMATMVNLHTLALNGNYFNDTIPNWFDSLSNLNVLSLKNNQLIGSFPSSICKIKSLNDISLSQNELSGELPDLSALTSLHVLDLRENHLDSKLPLMPKTVVTVLLSKNSFSGEIPSEFGELERLQHLDLSSNDLSKTPPNTLFSLPNISYLNLASNALSGSLPNKLRCGNKLGFVDISNNKLNGALPSCLAGTSDRRVVRYGGNCLSADSQPQQRGSYCNSGLKKFSAWEIAVVVGIIFVVVPVILASGVLLYRQGYLRETYENEVFPKVVQDSSTTGVSSEFLASARFISQTLKLGTQATSFYRQFSTEELKDVTKNFDLSTYIGEGSIGKLYKAKLENGSYTVIRSVALSKKCSIQNLKIRLDLLSKLQHPNLVSLLGHSIDGGGQDDSSIPKLYLVYEYVPNGDYRSRLSEFSPEKALKWSDRLAILIGVAKAVHHLHTSVIPGCFGNNLKTNNILLDEHDIPKLSDYGMSIIAEEIAKTEAKEDNPELDDDVYNFGFILFESLVGPVASGKGEAFFLNEKASFDSHDGRRRIVDPTVLTTCNQESLSIAISITSKCISAESSSRPSFEDVLWNLQYAAQVQATAEAEQ 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02859 754 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Aip06g02859 754 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
Aip06g02859 754 ProSiteProfiles Protein kinase domain profile. 481 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02859 754 PANTHER OS07G0166700 PROTEIN 2 754 IPR045272 GO:0004714|GO:0006468
Aip06g02859 754 Pfam Leucine Rich Repeat 145 160 IPR001611 GO:0005515
Aip06g02859 754 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 754 - -
Aip06g02859 754 SMART LRR_typ_2 307 331 IPR003591 -
Aip06g02859 754 SMART LRR_typ_2 238 261 IPR003591 -
Aip06g02859 754 SMART LRR_typ_2 283 306 IPR003591 -
Aip06g02859 754 SMART LRR_typ_2 143 167 IPR003591 -
Aip06g02859 754 SMART LRR_typ_2 191 215 IPR003591 -
Aip06g02859 754 Gene3D Transferase(Phosphotransferase) domain 1 565 754 - -
Aip06g02859 754 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Aip06g02859 754 Pfam Protein tyrosine and serine/threonine kinase 483 670 IPR001245 GO:0004672|GO:0006468
Aip06g02859 754 SUPERFAMILY Protein kinase-like (PK-like) 462 740 IPR011009 -
Aip06g02859 754 Gene3D Phosphorylase Kinase; domain 1 443 564 - -
Aip06g02859 754 Gene3D Ribonuclease Inhibitor 262 387 IPR032675 -
Aip06g02859 754 Gene3D Ribonuclease Inhibitor 26 261 IPR032675 -
Aip06g02859 754 SUPERFAMILY L domain-like 116 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02859 Aip-Chr6 121010314 121015517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02859 18 688 Miscellaneous Gene Families AT5G14210 55.878 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aip06g02859 PK_Tyr_Ser-Thr 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02859 - - gmx:100784640 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02859 06 121010314 121015517 Aip06g02859 06 121010314 121015517 ECH