Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02847 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTTATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTGTGTTGAGAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAAATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCAATGCTTTACATTATTATTTTCTATACAGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTTCGCCCATTCATTGGAAGAGCTTTACAAGCATTCTATAAGCATGATAGTCCAGAGTTGATACCGGATCCGGAGAGAGTTCCTGATAGGCGACCGCAAGTTGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAA 630 0.4349 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMCVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDQCFTLLFSIQVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVPDRRPQVVQNAPRRQLRR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02847 209 Gene3D - 12 77 - -
Aip06g02847 209 PIRSF GINS_PSF2 2 209 IPR007257 GO:0005634|GO:0006260
Aip06g02847 209 Pfam GINS complex protein 54 161 IPR021151 -
Aip06g02847 209 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 190 IPR007257 GO:0005634|GO:0006260
Aip06g02847 209 SUPERFAMILY GINS helical bundle-like 73 180 IPR036224 -
Aip06g02847 209 SUPERFAMILY PriA/YqbF domain 12 71 - -
Aip06g02847 209 MobiDBLite consensus disorder prediction 185 209 - -
Aip06g02847 209 Gene3D - 78 184 - -
Aip06g02847 209 CDD GINS_A_psf2 66 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02847 Aip-Chr6 120782788 120790155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02847 1 145 Core DNA Replication Machinery Family AT3G12530 65.068 2.48e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02847 K10733 - gmx:100780528 357.066