Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02841 ATGGATAGTGGCAGCGAAGGGAACTCGGACTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCCGAAGAGGAAGAGGAAGAGGTGTCTAAGGGGTTAGAGTCACCGTCACGAGTGTGCAAGGATAGTGAGACGGTAGAGAGAGTTGATGTATTTGGTGAAGGGGACGATGGTGGCAGAATGCCTTCATCGGAGTCACCACGTGGTTCAGGCAATGAAATGAGTGATGATGTGGACACTTCGATGTTTTCAACCGCGGCTGCATTGGCCGATGCCGAATTTCATAGGGTTGAAGATGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTGGATTTGCTGTTCAAAAAGGGGATTCCATTAAAGATGATGAAGGAAATGTTGTGAGAAAATTTTCCTATTGCAATCGACAGGGCTTGCGGGAGAAGAAGCACTATGAGAGGGCGGATAGGAAGAGGGCGCATAAGGCAGATACTAGGACCAACTGTAGTGCGAAGTTCGTTGTATTTTTAGACAAACAGAGTGGCAAGTGGAGGACGAAGACATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCAGCCCACCGCAATATCAACGAAGGTGATAAAGCCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAATCAGATCATGTGGTTCTTTGCATATTTGTCTGGGGGTTATCAAAACTTGCACTTCATAAAGAAGGATGTTTACAACTATATCGACGATGTACGTCGCTCTCGGATTGTTCAGGGCAATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACTGAGATGGATCCATTAGCTGTTGTGATGTACACATATTGTCCCGAAAACCACCTTGGTCATCTGTTTTGGTCAGACGGAGCGATGCAGTATGACTATGAGTGCTTTGATGGAGACGAGTCAACGAAGGAGGCTATTAGGACAGAATTCCCTAATGCCACGCATCGACTTTGCACCTGGCACTTAGCGTGGAATGCTGTTTCAAACATCAAGGATAATGATTTTTGTGCTGCTTTTAAGACTGCTGTGTATGGTCATTTTGAGGTAGAGGAGTTTGATCAGTATTGGGCAGACATGGTTGATGCATTCGGGTTACAGGAGAACGAATGGATTTGGGCAACGTACGAGAAGAGGGTACATTGGGCAAATGCATATTTGTGTGATACGTTTTGTGCTGGGTTGAGAACGACGTCAAGACGCGAGGGTATTAATGCATTGCTTAAAAGGTTTATCAAGTCATCGAATTGTTTGTTGGAGTTGGTCGAGAATCTTAAACGTGTGGTTAAGGACTACAGGAATAATGAGTTTATCGCGGATTACAAATCTCTATATTCAGAACCGGTCATAACTACTGGACTGGAATCAATTGAGAGGGCCATGTCACAAATCTACACTAGAGAGATATTCTTCGAGAACAGCATTAGAATTCTGTGTTTTGAAAGAGCTGGAGAAGGATGCCTTGCAATGTGGTTGGTGCGGAAAAGGTGGTGCAAAGATGCTAAGTCTGGATCATTCCACGACTTGGACAGAGGTTTGGATAGTAATAGAGCATTTCGGGGGCGGTATGGTTCGTTGTGGACTTCTTGCCTCCCTATGTGTTTGTTAGCGGCTCAACGGCCTGCCACGTACAAGTACGCTGCTGCCAAGATAGCACAGCTATTAAAAGAGATTGAAGCGAAAGTTCCGAAGGGTAATAGTTCAACTTTCGTGCATGATACTGTAGATGGTGAAGATATTTTAGATTCAAAGATTATCAAGTCAAAAGGTACACCGCGGTCAACCGGCAACGACAAAATGGCTAGGCAGTGCAGGCGCTGCCACGGTTTTGGACATGATCGGCGAAATTGCACAGCAAACAACGAGGACATGTTAGATGAGTCATTAGGGTCCGATTTGAGACAAAGTCAGCTTGGTGGAAAAAGATCTTGCCATGCCAAGAATTGTGGGTCAGCCAAGACACCATTTTTGCATGATCAAGGAGTTTCAACCATTAACACCTAA 2049 0.449 MDSGSEGNSDFSGQWTDGWSSESEEEEEEVSKGLESPSRVCKDSETVERVDVFGEGDDGGRMPSSESPRGSGNEMSDDVDTSMFSTAAALADAEFHRVEDAYARYVEYAKATGFAVQKGDSIKDDEGNVVRKFSYCNRQGLREKKHYERADRKRAHKADTRTNCSAKFVVFLDKQSGKWRTKTFVQDHNHDLTLPAFTNVMAAHRNINEGDKAHIHSMHEAGFQTNQIMWFFAYLSGGYQNLHFIKKDVYNYIDDVRRSRIVQGNAAAAISYLKGKTEMDPLAVVMYTYCPENHLGHLFWSDGAMQYDYECFDGDESTKEAIRTEFPNATHRLCTWHLAWNAVSNIKDNDFCAAFKTAVYGHFEVEEFDQYWADMVDAFGLQENEWIWATYEKRVHWANAYLCDTFCAGLRTTSRREGINALLKRFIKSSNCLLELVENLKRVVKDYRNNEFIADYKSLYSEPVITTGLESIERAMSQIYTREIFFENSIRILCFERAGEGCLAMWLVRKRWCKDAKSGSFHDLDRGLDSNRAFRGRYGSLWTSCLPMCLLAAQRPATYKYAAAKIAQLLKEIEAKVPKGNSSTFVHDTVDGEDILDSKIIKSKGTPRSTGNDKMARQCRRCHGFGHDRRNCTANNEDMLDESLGSDLRQSQLGGKRSCHAKNCGSAKTPFLHDQGVSTINT 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02841 682 MobiDBLite consensus disorder prediction 1 19 - -
Aip06g02841 682 PANTHER OS02G0262500 PROTEIN 313 499 - -
Aip06g02841 682 MobiDBLite consensus disorder prediction 1 79 - -
Aip06g02841 682 PANTHER OS02G0262500 PROTEIN 89 312 - -
Aip06g02841 682 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 313 499 IPR031052 GO:0006355
Aip06g02841 682 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 312 IPR031052 GO:0006355
Aip06g02841 682 Coils Coil 430 450 - -
Aip06g02841 682 MobiDBLite consensus disorder prediction 32 56 - -
Aip06g02841 682 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02841 Aip-Chr6 120555476 120558003 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02841 FAR1 3.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02841 - - ahf:112757616 991.104