Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02836 ATGCCGGAGGAAACGACGTCGATCGACTATGTCATGGAGGCAGCCTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGCCTCCTCTCCTCCCCGCCCTCCTCCTCTACCTCCTCTCCCGCCCATCGCTTCTCCTCCGCACCCGATCTTTCCTCCGCCCTATCCCCCGATTCTCTCAACCAGCCCTTCGTTATTGGTGTTTCTGGAGGTACTGCTTCTGGGAAGACCACTGTCTGTGACATGATCATTCAGCAGCTTCATGATCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAAAGAGTTCACGAGTACAATTTTGATCATCCAGATGCCTTCGACACCGAACAGCTATTAGAGTGCATGAGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCATTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAGCATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTTAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTCGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTCACCGAAAAGCAAGTCGTTACTCCAACAGGATCTGTCTACACTGGTGTTGATTTCTGCAAGAAACTATGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGTGCATGTTGTAAGGGCATTAAAATAGGGAAAATTCTGATTCATCGGGATGGAGACGATGGACAACAGCAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCCGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGATGCCGCCTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGCGAGTTTGGGGATCGCTACTTTGGTACAGATGATTGA 1449 0.4582 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSTSSPAHRFSSAPDLSSALSPDSLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMRKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGQQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNDEFRVIPGLGEFGDRYFGTDD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02836 482 Pfam Uracil phosphoribosyltransferase 281 480 - -
Aip06g02836 482 Gene3D - 58 265 IPR027417 -
Aip06g02836 482 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 16 479 IPR029930 GO:0004849|GO:0044206
Aip06g02836 482 PRINTS Uridine kinase signature 208 219 - -
Aip06g02836 482 PRINTS Uridine kinase signature 137 152 - -
Aip06g02836 482 PRINTS Uridine kinase signature 92 103 - -
Aip06g02836 482 PRINTS Uridine kinase signature 230 243 - -
Aip06g02836 482 PRINTS Uridine kinase signature 62 79 - -
Aip06g02836 482 PRINTS Uridine kinase signature 194 204 - -
Aip06g02836 482 SUPERFAMILY PRTase-like 281 479 IPR029057 -
Aip06g02836 482 CDD UMPK 64 262 IPR000764 -
Aip06g02836 482 Pfam Phosphoribulokinase / Uridine kinase family 64 250 IPR006083 GO:0005524|GO:0016301
Aip06g02836 482 CDD PRTases_typeI 337 453 IPR000836 -
Aip06g02836 482 TIGRFAM udk: uridine kinase 62 262 IPR000764 -
Aip06g02836 482 MobiDBLite consensus disorder prediction 25 51 - -
Aip06g02836 482 MobiDBLite consensus disorder prediction 28 51 - -
Aip06g02836 482 Gene3D - 266 480 IPR029057 -
Aip06g02836 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 255 IPR027417 -
Aip06g02836 482 PANTHER URIDINE KINASE 16 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02836 Aip-Chr6 120456259 120462402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02836 1 482 PRT Gene Family AT5G40870 85.744 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02836 K00876 - gmx:100780005 842.417