Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02834 ATGCCTCCAAAGAAGAAGAAGAACAACACTTCTTCTTCTTCTTCTGCGTCCAAGAAGCATAACCCTCAACCTTCCAAGTTCGGCATCCAGCACTTCTTCGATCGCCACACACAGAACAACGCTCTCCTCGCCTCCCAAAAGCTCCAAACTAACAATGCTTCCGATTCCGCCGCTAAACCAGTTTCTGATCCTCTCCCTGCCCGAACCAGAGACCCGATTTTCAGCACCGTTGTGCAGGTGACTCCCCAACCGTCGCCGCAAAAACCTAGCGACGACAAGGGTAATACCAATTATATTAGTAATAATGATAATAGAAGTAACAATGGACCGTCCCAGAATACTCCTACTGAGAATTCGGTGGTGCCGGTTGATAATGTGATGGAAGATATTGTGTCTGAGGTGTCCCCAGATATTTCTAAAGCTATGCCGCTTAAGCGCTTCAAATTCTCACCTGGAATGTTTATAAAGCAGACTCAAGATTATGGGGTTGATGAGGTCACATGGAAGATATCTCCAGTGAACGAAAGACTCCAAGCTGTTTCTAAACATGTGCCGAATGTTATTAAAGCGTTGGCCGACTCTTCAAGACTCAACTTATTGCCATTTCGTAGCTGCTCAGAAGATAAGACTTTTCGGGATAAAGATGACAAGGTTGACGAATTGCTTACTTCACCAACTCCCAAGGCTTCTGCAAAAGCTCTACCTTCAATGAGTAAATTAGGCTTGAAAAGGATAAACCCAGAACAAAGTGTGGATTTTGACACCAATCCAACTACTCTGAGCTACACTGGAGTATCTAGCAGACAGAGTCCCTTCAGGACTCCACCCTCTTTGTCTCATTGTCCCGATAAGGTGCATCCTATTAATGACATTCAATGCACTGGACCATCTGATCAACTTTATCTCAGACAGCACAAAAAGACTTTGCTTGAACTGTTAGATCAAGTTGAAGATGCCATTGCTGTTGATGACGCTACTGTTTGTAACAAGGGAACTGATTCTTTAAAATGTTGTGACGGCATTGCTGATGAGCTCCCTGTTAGAGCCAACCATGCTGAAGAAAGAACAAGATCACATAGTTCTAAAGAGGATATGGTTGCTGTCTCTAGTTCTAGCTATCTGGTTTTGCAGGTGTCTGAAAATTCTAGGTCTGCTGATTCATCTGCTGCTGATGCTCGATCCCCATACAAGGTGCTTCGCTTACTAAATGAGCAAACTGGAGAGGAGCGGGCTGTAAACTTGAGGGATGAGTGGTTTTTCAGTGTAATTGCACCTGGAGATACTGTAAACATAATCGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTCACAGAAGACAATCCATCCATTGACTTCTTGGAAGGTTACACAGAAGTGGTATTACTTAGGAACATTGAGAGTCTGTATGCTTGTGGAGTAAATGAAAGTGATGTTCGGAAAACCTTGATTGATGCTGTCCCGAGAATATTGAGTTGGATTTTACGGTTCACAAATAAGGAGGAAAATGAAGATCCTAATGTTTGTTTTGGATTTCACAATAGGCCTAACAAAGTTGCCATATCTGAGGCAAGCTCTAATCTAACCGATTTGTTTATTGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCAGTCAGAGTCACAGTACAATCAGTAAAAGATGAACTTGAGGAGAAGATTATGCCAGTAGAGTTCAAAACCGGGAAATCACCAGCTGGCCAGGCACGACTCATATATGATGAAGAAGTTTTCGGGAAGACGTTTTACTTTTTGTTTTATTTACGTCGTTCTGATCATGTTATTAGGTATCAAAACACCATTGATTCTGGTCTTCTATATTATCTTCAATCAGATCAGACACAGGGTATTGTGGCTCAAAGATCTGACTTAGTTGGCCTAATAATGCGACGGAACGAGCTAGCAAGTGATATTCTTAAGGCATTAACCTCGCAACAACTTCCACCAATGTTAAAGAGTCCTGGCATTTGCAAAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGTTACATGGTGGAAGCACAAAAAGCAGTGGATTGGAAGATGTATTTGATTCTCTTACTGACCACCTTACATCTTCCCATTCCAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTGGAAGCTAAGGAGACTGAGCTTTTAAGGAAAGAGATGTGGCGATCACATAGTTTAAAAGCTCCAAACTGTGGTAGCCTTTCTTCTATTGTTCTCGATGCTTCATATGGAATTCCTCATCAGAAATCTGTCAAAGATAATCGCTTTGTTTATCGTTTTGTAAGACAAGATAATTGTCCCTCTGGAGTTTCTGACGGTGATCATTGTAGTACCTATTCAACAAATTTAGATCTTACACTTGGAAGTGGAGACTATGTGGTACGGATAATCTCCTTTTTATTTAATGACTCTAGTGGGCAAACTATTGCAAAAGGGGTGATCTCTGATATTAGCCAGATTCATGTATCTGTTTCCTTTTCAAAACGCTTACGAATTCCTGGAAGATGTTCCACTACACATGATCTCCTTCAACAGGTTTGGAGAATTGACAAGGATGAATTTGTGACTTCGTTTGCATCTATGAGGTTTAATCTTGCACAACTTTTTCTACAAAATGATCGGAGTACTCATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGGTTTGACTGTGAATCTATAGTCAGTCAGGATCCAGCAATATCATATGTTCGGTCGAAGAAATCTTTGAATGATGATCAATGTAAAGCAATTCTCAAGATACTTGCAGCAAAAGATTATGCGCTTATATTAGGAATGCCTGGAACAGGAAAGACTTCTACTTTGGTTCATGCTGTGAAAGCCTTGCTGGAAAGGGATTCTTCCATTTTGCTGACAGCCTATACAAACTCCGCAGTTGATAATTTACTCATGAAATTAAAAGCACAGGACATTGATTTTGTTCGGATTGGAAGACCAGAAGCAGTGCATGAGGTGGTCAGAGGACACTGCCTTTCAGCAACAAGTATACAAAATGTTGAAGATATCAAAATAAGGTTAGGTCAAGTCAGAGTTGTTGCAGTTACTTGTCTTGGCATTTCCAGTCCCTTGCTTGCCAACATGAGATTCGATGTATGCATTATGGATGAAGCTGGACAGACAACCCTACCTGTGTCCTTGGGCCCCCTAGCATTTGCCTCAGTGTTTGTACTTGTTGGGGATCATTATCAATTGCCTCCACTTGTCCAGAGCATAGAGGCCCGAGAGAATGGCATGGGGATAAGTTTGTTCTGTAGGCTCTCCGAAACACATCCAGAGGCAATTGCGGAATTACGGAGCCAGTACCGGATGCGTCAAGGCATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCATCTGAAATAGCTAATGCAACACTTGAGTTTTCTAATTTAAACTGTGGCTTGCCTTGGCTAGAAGATGTTTTAAATCCAAGCAGGCCAGTGATTTTTATTGATACTGACATGTTACCCGCTTTGGAGGTAAGAGATCAGAAGACTGTCAATAATCCAGTTGAAGCTCACATAATTGCCGAGGTTGCAACGGAATTGGTTAGAAATGGAATTGTAGGAGAGCAGATTGGTGTTATTACCCCCTATAATTCACAGGCAAACCTCATCCGGAAAGCAGCTTCCGAGACTTCCATGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAGGATTGCATATTAGTCTCTTTCGTAAGATCTAGTGAAAACCCAACGAACCTTGCTGCTTCTCTTCTCGGAGACTGGCACAGGATAAATGTGGCTCTCACTCGCGCTAGGAAAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTTTCAAAGGTTCTGCTACTGAAACTTCTCATTAAGAACGTTGAGGAACAATGTGGAATTATAAGTGTTTCGAAGAAGGATATCGTTCCAAAAGAGAAAAGTCTCATTCACGTTCCTCCCCTTATTCGTTCATTGGTTGCACAGTCTGTCAACTACCGAGATCAACTCCACTGGAATATTGCTGGAGGGTTTCGCTTCTCCGGTGTCACTGCCGTCGTCGTAGGCGCTGGTGCTGCTTCTAAGAAAGACAACTCTTAA 4191 0.4211 MPPKKKKNNTSSSSSASKKHNPQPSKFGIQHFFDRHTQNNALLASQKLQTNNASDSAAKPVSDPLPARTRDPIFSTVVQVTPQPSPQKPSDDKGNTNYISNNDNRSNNGPSQNTPTENSVVPVDNVMEDIVSEVSPDISKAMPLKRFKFSPGMFIKQTQDYGVDEVTWKISPVNERLQAVSKHVPNVIKALADSSRLNLLPFRSCSEDKTFRDKDDKVDELLTSPTPKASAKALPSMSKLGLKRINPEQSVDFDTNPTTLSYTGVSSRQSPFRTPPSLSHCPDKVHPINDIQCTGPSDQLYLRQHKKTLLELLDQVEDAIAVDDATVCNKGTDSLKCCDGIADELPVRANHAEERTRSHSSKEDMVAVSSSSYLVLQVSENSRSADSSAADARSPYKVLRLLNEQTGEERAVNLRDEWFFSVIAPGDTVNIIALTGTLLHQIFQAGLTEDNPSIDFLEGYTEVVLLRNIESLYACGVNESDVRKTLIDAVPRILSWILRFTNKEENEDPNVCFGFHNRPNKVAISEASSNLTDLFIVIDIEEMAWAPKYGLKGMIDASVRVTVQSVKDELEEKIMPVEFKTGKSPAGQARLIYDEEVFGKTFYFLFYLRRSDHVIRYQNTIDSGLLYYLQSDQTQGIVAQRSDLVGLIMRRNELASDILKALTSQQLPPMLKSPGICKGCRHLNVCSIYHKLHGGSTKSSGLEDVFDSLTDHLTSSHSKFLCHWDRLIDLEAKETELLRKEMWRSHSLKAPNCGSLSSIVLDASYGIPHQKSVKDNRFVYRFVRQDNCPSGVSDGDHCSTYSTNLDLTLGSGDYVVRIISFLFNDSSGQTIAKGVISDISQIHVSVSFSKRLRIPGRCSTTHDLLQQVWRIDKDEFVTSFASMRFNLAQLFLQNDRSTHLRRMIVDLEAPRFDCESIVSQDPAISYVRSKKSLNDDQCKAILKILAAKDYALILGMPGTGKTSTLVHAVKALLERDSSILLTAYTNSAVDNLLMKLKAQDIDFVRIGRPEAVHEVVRGHCLSATSIQNVEDIKIRLGQVRVVAVTCLGISSPLLANMRFDVCIMDEAGQTTLPVSLGPLAFASVFVLVGDHYQLPPLVQSIEARENGMGISLFCRLSETHPEAIAELRSQYRMRQGIMDLSNALIYGDRLRCGSSEIANATLEFSNLNCGLPWLEDVLNPSRPVIFIDTDMLPALEVRDQKTVNNPVEAHIIAEVATELVRNGIVGEQIGVITPYNSQANLIRKAASETSMEIHTIDKYQGRDKDCILVSFVRSSENPTNLAASLLGDWHRINVALTRARKKLIMVGSRRTLSKVLLLKLLIKNVEEQCGIISVSKKDIVPKEKSLIHVPPLIRSLVAQSVNYRDQLHWNIAGGFRFSGVTAVVVGAGAASKKDNS 1396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02834 1396 MobiDBLite consensus disorder prediction 32 58 - -
Aip06g02834 1396 Gene3D - 1131 1339 IPR027417 -
Aip06g02834 1396 Pfam AAA domain 933 1023 IPR041677 GO:0004386
Aip06g02834 1396 Pfam AAA domain 1036 1100 IPR041677 GO:0004386
Aip06g02834 1396 Gene3D - 811 874 - -
Aip06g02834 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 931 1316 IPR027417 -
Aip06g02834 1396 CDD SF1_C_Upf1 1133 1311 IPR041679 -
Aip06g02834 1396 PANTHER DNA2/NAM7 HELICASE FAMILY 228 1327 IPR045055 -
Aip06g02834 1396 MobiDBLite consensus disorder prediction 74 119 - -
Aip06g02834 1396 Gene3D - 875 1025 IPR027417 -
Aip06g02834 1396 Gene3D - 1032 1130 IPR027417 -
Aip06g02834 1396 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 228 1327 IPR026851 GO:0017108|GO:0017116|GO:0033567
Aip06g02834 1396 MobiDBLite consensus disorder prediction 1 119 - -
Aip06g02834 1396 MobiDBLite consensus disorder prediction 1 24 - -
Aip06g02834 1396 CDD DEXXQc_DNA2 932 1132 - -
Aip06g02834 1396 Pfam AAA domain 1110 1309 IPR041679 -
Aip06g02834 1396 Gene3D - 524 687 IPR011604 -
Aip06g02834 1396 Pfam DNA replication factor Dna2 433 561 IPR014808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02834 Aip-Chr6 120398235 120420053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02834 1 1074 Core DNA Replication Machinery Family AT1G08840 46.997 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02834 K10742 - gmx:100799415 1543.48