Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02809 ATGGTTTCGGAGTTGCATATGTTTTACTTGGCCTCAAAGTATTATATATTTGGTTTCGATTCGCCTTGTGGCCTTGGTGGCTCTTTCAAGTCTGGCAAATCAATTTGGATTTTTGATTCTGCTAGCTGTTCAAACCAACTAGAATCAAGATCATTTCTTGGGAGACAGCTGGTCTTCAAACGGTTGTTTTTGTGCCTCTTAAAGCCGGAGTTGTTGAGCTTGGTTCCGTGGAAACAGTGCCAGAAGACCAGGGTGTTTTGGATTTGGTCAGGACAGCATTTGGTGCGAGTAAGTTGCCCCTTAGATCTCCACCCGATTTCCAGAGTCATTAAGACATTACAGGAGCATCAAATCATGGCTCCAGAGTCAGGTGTTTCAACATCGGAGGGAAAGATGATTCATACATTCTCCATAAGAGCGCAGGGCAGCAAGGCTGCTGCAATACAATTGAAGGAAAATCTTGAAGCATCCTTATCCAAAAACTGA 486 0.4362 MVSELHMFYLASKYYIFGFDSPCGLGGSFKSGKSIWIFDSASCSNQLESRSFLGRQLVFKRLFLCLLKPELLSLVPWKQCQKTRVFWIWSGQHLVRVSCPLDLHPISRVIKTLQEHQIMAPESGVSTSEGKMIHTFSIRAQGSKAAAIQLKENLEASLSKN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02809 161 PANTHER TRANSCRIPTION FACTOR BHLH3 2 72 - -
Aip06g02809 161 PANTHER TRANSCRIPTION FACTOR BHLH3 93 160 - -
Aip06g02809 161 PANTHER MYC 93 160 IPR045084 GO:0003700|GO:0006355
Aip06g02809 161 PANTHER MYC 2 72 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02809 Aip-Chr6 119978723 119979208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02809 2 63 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 39.683 4.85e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02809 - - ahf:112757608 328.176