Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02798 ATGGAAACCGTTGACGCCTTCCTGACCTCCGGTGACCGCAATAAACCCAATACGTTTGAAATATGGGTTCAAAGTAGAGTGTTGCAGCGCCCAATTTTCTGGTGGATAGTTTCTATTGTTGGAGCTGTTGTCGGATTAATAGGTTTTGGTCTAAGCTCCAACTTAAAGCATCTATTGGGAGACCCAAAACCATGGAAAAACGTTGGGTACACTCTTTTCTGTGTCTCCGTTGTTGTTTTTGCAGTTGTCCTTCATCGGTTGAAAGGTCCAGCCAAGGTGTTACCTTATCGTCGCCAATTCAAAGCGTGTGGTGTATTCCTGGCCCTGTTGGTGATCTTTATCTACACCTTCTTTTCCAGAAGAGGGGAAGAACAAGAACAACAACGGAAAGGACACAATGATACACCAAATAACGTACAAGTTGCTGGTATAGTATCCCTTGTTGGTTTTGTTGTGATGGCTTTTGCTCTATCAATACAAACTAACTATGGATTTGTTGGAGAACTTATGAAATTCTTTTTAGAAGAACTTATGGTGGAGCTCATAAAGATAAGATGGTGGTACGGCTTCTTTGGAGCTCTCTTCAGTTTTCTCCTCATCATTCTCCATTCATGTAAAGAGAAACATGCCGAAGGAGATGTGCATCAAGATCCAATTGACAACAACACTACTCTCCTCCTAGATATTAGAACGGATTCTTTGTCTACTGTACGTCCAACTCAAGATCTCTTCACCCTTGCGCTACTAAATCTTAACAAGAAGGATTTGGAACTTTCCCAAAATTTACGGCGTCATTTGATTGGCTACATCAATGATTGGAGTGACCAGATTCCGGAGGGAATAATGCAAGACCAAAACTTCATTAAGGACAGGATTCGGCGCGAAGTTGAGACTCTTCACTTAATAGGAAATCGGACAACTCGACGGCCCAGAATAGTACGTGACTTAATTGTTCCAGAGTTCCATTCACTGTTTCCTCATAATCTATCCATGACCATCGAAATGATTGATCTCACAAAAAAACTAGGAGAAGCAACGAGAGATTACTATTTCAGGGATGACGACTTTCCTCCCGAAATTGAAAACTCTCATTCCTGTGAGCCTCATCCAATTACCATCCAAGTATTGAACCGCCTCGATATTGCTTTCAAAGACAGGGACATCATTGAACCACTCCTCAAAACATACCCCAATTCCAAAGTTCAAGTTCGGGAGGAATGGTCTTTGATTTCACACTATATAGATTGGAATATCAACAAACTTGAGGCCTCCTTAGAGTCCACGTTGAAGAAGACCTACATTTATGAATTGCAAGGAGTGTCTATCATGGCTAATGTTAACTACATATTAAAGAAGGCTTACGAATTTGGATTTGAATTAACTAAGAAAGATGGTTGGCTCAAAGAACAAGCGTCCAAAATTCAACAGTGCTTTGAACAATATTATCGGGAGAATCCGACTGAATTGTTGGCCTTTTTCAAACAGCATAATGAGAAAGTCACGGAACATTCAATGAGGGAGATGCTAAGGTTGTTCAATTTTAACCATTTACTTGAGAAACAATCCTATAGTTATCAAGGAGAGCTAATACTTTTAGTGAACAAGGGATTTGTCCCAAGTTGTGAAAATTTCCTTCACAGATTTCGTACTTTACTAAATGGCAATGAGGACACACACCACACATATATACCAACTATTGAAGATGAAATTGAAGGTAAGACTGCCGATTCTTATGACTGGTGTTGGATTTATTATTATCCTAATAATGTACTTAGTTCTAAGATGCATGCCTTTATTAATTTCTTTTGA 1809 0.3958 METVDAFLTSGDRNKPNTFEIWVQSRVLQRPIFWWIVSIVGAVVGLIGFGLSSNLKHLLGDPKPWKNVGYTLFCVSVVVFAVVLHRLKGPAKVLPYRRQFKACGVFLALLVIFIYTFFSRRGEEQEQQRKGHNDTPNNVQVAGIVSLVGFVVMAFALSIQTNYGFVGELMKFFLEELMVELIKIRWWYGFFGALFSFLLIILHSCKEKHAEGDVHQDPIDNNTTLLLDIRTDSLSTVRPTQDLFTLALLNLNKKDLELSQNLRRHLIGYINDWSDQIPEGIMQDQNFIKDRIRREVETLHLIGNRTTRRPRIVRDLIVPEFHSLFPHNLSMTIEMIDLTKKLGEATRDYYFRDDDFPPEIENSHSCEPHPITIQVLNRLDIAFKDRDIIEPLLKTYPNSKVQVREEWSLISHYIDWNINKLEASLESTLKKTYIYELQGVSIMANVNYILKKAYEFGFELTKKDGWLKEQASKIQQCFEQYYRENPTELLAFFKQHNEKVTEHSMREMLRLFNFNHLLEKQSYSYQGELILLVNKGFVPSCENFLHRFRTLLNGNEDTHHTYIPTIEDEIEGKTADSYDWCWIYYYPNNVLSSKMHAFINFF 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02798 602 PANTHER PROTEIN, PUTATIVE-RELATED 319 516 - -
Aip06g02798 602 Gene3D Exocyst complex component Exo70 311 579 - -
Aip06g02798 602 Pfam Exo70 exocyst complex subunit 366 519 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip06g02798 602 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 295 IPR004140 GO:0000145|GO:0006887
Aip06g02798 602 PANTHER EXOCYST COMPLEX PROTEIN EXO70 319 516 IPR004140 GO:0000145|GO:0006887
Aip06g02798 602 PANTHER PROTEIN, PUTATIVE-RELATED 34 295 - -
Aip06g02798 602 SUPERFAMILY Cullin repeat-like 319 521 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02798 Aip-Chr6 119834153 119836179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02798 302 570 EXO70 exocyst subunit family AT5G58430 25.828 3.89e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02798 - K19416 ahf:112697185 558.525