Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02796 ATGGAGTGCTATGGTGGGATGGGCAAGGCAAACGGTTTGTCTCCAGATGAAAGTGAAAATGAGTTATGCCTTTCAAACAACGACGTTGTTGACGAGAATGACTTAAGAAAGGTTGAGTTGTTGTCAGATGAAGATGGTCGTGAATATGGTTACGTGACTGGGTTGACTGCAGAGGACATAATGAAAAAGGTGTTTCGAAGTGAAGAGCATGCATATGAGTTTTATGGTAGGTTAGGGAAATGCAACGGATTTGGGGTCCATAAGGGAGACTATGCAAAGGATGAAGATGGGAGTGTAGTGAGAAGGAGGTTCTTATGTAATCGGGCTGGCCTAAGGGATGGAAAACACTACAACAGACTAGACAGGAAGAGATGCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGTAGCTCGGTTTGGAAGGTTCGAAAAGTAATCCTCGAGCATAACCACGAGTTGATACCGACGGGAATGGTTCATATGATCTGA 516 0.4516 MECYGGMGKANGLSPDESENELCLSNNDVVDENDLRKVELLSDEDGREYGYVTGLTAEDIMKKVFRSEEHAYEFYGRLGKCNGFGVHKGDYAKDEDGSVVRRRFLCNRAGLRDGKHYNRLDRKRCHRPETRTNCQALMSVYLDKGSSVWKVRKVILEHNHELIPTGMVHMI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02796 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 170 - -
Aip06g02796 171 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Aip06g02796 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02796 Aip-Chr6 119789400 119789915 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02796 FAR1 2.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02796 - - ahf:114925516 360.918