Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02781 ATGGGTGAAAGGTGTGACTTTCTTGAAGAAATCTCCACAACGAGAGCAGATTGGATCATTAAGGTTTATGTTGTAAGGATGTGGTATGGTCCTCCACGACCAAATAGTAGTGAAATTGGTGCTTTAGAGATTGCATTCCACGGCTCGAAGGGCTGCAGGATACACTGCACGATTCCAAAATCAGTGGCATTTACATTTAGGAGTATTGCGTCTATCCTGCAAGAAGAAAGACTTGATCAGAATTTTCTTTTTGATGTGCTAGCAGAGGTTATAGGGAAGGAGAACCCAAAGGATTTGGTTACCAAGCAAGGACAGAAGAGCAAGCAATTAGGGTTGTTAGTGGAGGACCTTGAGAAGAATTCTATTAGCTGTACCCTATTTGGTTCACTAGTGGATTTGATACAACCCTATTTAGATGGTGATAAGACTGAACCTCTCATAGTTACATTCCAACTATTCAGAGAAAAGGAATGGAATTGGAAGATTAGTATTCATAGTAGTTTTGACACGTCTAACCTCCACATAAATCCCAATATTAAGGAGGCCGAACTATTTAAAAAGAGTTCATATCGATTTGCTATCGATGAGCTCAGGAAAGGGATATGCAAAGTTGAAACAATAGACAATGTGTTGAATGCAAGTGATATAGAGGAGATGTTTGAGTGTGACCATTGCCACAAGAAGGCCGTTCAGGTAGACTTGCGGTATAAGCTTCAAGCTTATGTTTCTGATGCAACTGGAAGTATGTGTGTAGTGTTGTGGGATACAGAAGCAAGCCAAATTTTAGGGTTGAGTGCAACCAAAGTCAAAGAAAGCTACAGTGAGGATGATTCTGGTAATTCTTACCCGAAAGTACTAAAGACAGCCTTGGACATGAAGTTGATATTAAGGATTAATGTGAAAAGTAGTAATTTGAATGGGGTTGGAAAATGTTATAGCTTGGATTGTACTACTGATGTTTATCTTGGTGATGATGAATCTGTCCAAGGTGGACAGAATCCATCAATGAGTCTAAGACAGTTACCAGCAGTAAGCGAAGAGCTAAAAGGATTGATGCAGGAATTATAG 1068 0.3961 MGERCDFLEEISTTRADWIIKVYVVRMWYGPPRPNSSEIGALEIAFHGSKGCRIHCTIPKSVAFTFRSIASILQEERLDQNFLFDVLAEVIGKENPKDLVTKQGQKSKQLGLLVEDLEKNSISCTLFGSLVDLIQPYLDGDKTEPLIVTFQLFREKEWNWKISIHSSFDTSNLHINPNIKEAELFKKSSYRFAIDELRKGICKVETIDNVLNASDIEEMFECDHCHKKAVQVDLRYKLQAYVSDATGSMCVVLWDTEASQILGLSATKVKESYSEDDSGNSYPKVLKTALDMKLILRINVKSSNLNGVGKCYSLDCTTDVYLGDDESVQGGQNPSMSLRQLPAVSEELKGLMQEL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02781 355 Gene3D - 58 192 IPR012340 -
Aip06g02781 355 SUPERFAMILY Nucleic acid-binding proteins 64 188 IPR012340 -
Aip06g02781 355 SUPERFAMILY Nucleic acid-binding proteins 218 308 IPR012340 -
Aip06g02781 355 Pfam Replication factor-A C terminal domain 217 307 IPR013955 -
Aip06g02781 355 Gene3D - 198 319 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02781 Aip-Chr6 119324447 119326783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02781 222 307 Core DNA Replication Machinery Family AT5G61000 31.395 3.24e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02781 - - ahf:112716567 434.106