Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02780 ATGGCCATCTCTTTAAACACTCCTCTTCCCTTCCGCTTCCTCTCAGGCTCACCACCCCCATTCCCCCTTTCTAATTTAACCCCAATTTCACCCTCACTCAACCATAATCGCCTGAGTTCTTCCAGGTTCAACTTCCCTGCACCAACAACCAACCTCCCCACCATCAACTGCGATTACACTGCTTTTGAAGTTAGAGATGTTAGCTATCAGCCTCCGGGGACTCAGCTTAAGCTACTGAATTCAGTTAGTTTCTCACTTCCGGAGAAAAGTTTTGGTCTAATTTTCGGACAAAGTGGAAGTGGGAAAACAACACTCTTGCAGCTTCTTGCAGGAATAAGCAAATCGACCACTGGATCCATTTACAGCCAAAAGTATGGAAATGATGGAAATCCTATCCAGCCTCCTGAGCCTTTGTCACCAGAAAGAGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTTTAGCTGAAACTGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAGCTATCAATTGAGAGAAAATCTTGCTTTAGGGCTTCAAAGGGCAATTAACTGGGTTGGATTGAATGGGATATCATTGGACAAAAATCCTCATTCCCTTAGCGGCGGTTACAAACGGCGCCTTGCTTTGGCAATTCAATTAGTGCAAATCCCTGATCTATTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGCGCAGATGTTGTGAAGCTTTTAAAGCATCTAAAAAGGGAGTTAACTGTTCTTGTTGTCAGCCATGACTTGAGGAAGAAAATGATGTTGAGCACAAATCAGTAA 822 0.4392 MAISLNTPLPFRFLSGSPPPFPLSNLTPISPSLNHNRLSSSRFNFPAPTTNLPTINCDYTAFEVRDVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKSTTGSIYSQKYGNDGNPIQPPEPLSPERVGIVFQFPERYFLAETVLDEVTFGWPRQKGSYQLRENLALGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKRELTVLVVSHDLRKKMMLSTNQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02780 273 Gene3D - 54 272 IPR027417 -
Aip06g02780 273 CDD ABC_cobalt_CbiO_domain1 63 263 IPR015856 GO:0005524|GO:0016020|GO:0055085
Aip06g02780 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 265 IPR027417 -
Aip06g02780 273 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 52 265 - -
Aip06g02780 273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 271 IPR003439 GO:0005524
Aip06g02780 273 PANTHER HEAVY METAL TRANSPORTER 52 265 - -
Aip06g02780 273 SMART AAA_5 88 273 IPR003593 -
Aip06g02780 273 Pfam ABC transporter 79 232 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02780 Aip-Chr6 119295080 119304560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02780 63 263 Calmodulin-binding Proteins AT2G36910 24.299 1.94e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02780 - - vun:114196181 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02780 06 119295080 119304560 Aip06g02780 06 119295080 119304560 ECH