Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02766 ATGATCAATTCACTATGTGGAAGCTCAGTGTCTCTCAAAAGTGAGAATTCAAGCACAAAGCTACAGCCCACTTCTTCAAATGACTCAGTTTTACAATCAAATAAGAAAAACAATGCTACACAATCCTCTGTTGATTTATTAGAACAGAATAATAACAGTACCCTAACACCACCAAGCTTAAACCTTCCAGGACTCAAATTTGACCTTGATGGAGATGTTGAAGTCCAATCACCAGATAGTTCAATGTGGGAATCCTTTTTCTCTGATCAGTTAGATACTGATTTCATGATGTGTTCCCCAGTGAGGAATGTCCCTTCCCCACAACAAGCCTCAACTTACAATTGCAATTACAATTACGCTCATTCAATGCAAGCACAAAGCTTTTCCGGCTGCTCTCCGCCGCGGTTTTTGGCCCAAATCGGCGCCTATAATAGTAGCGGTGGAGGCGGCGGAGGAAAAGGGAAAGGGCTTAGTCCACTCCACAGGGTGTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAGAATCTTTCACTGCCTGCAATTGAGGAGTTCTTGGAAGAGTTTCAACAAGGGGAATACTCATCGATAACCGCCGCAAATAACAGCAGCAAAGTTGGTGACGGTTCTGATATTGTTGGAAGTTCTTCTGAATGCTTTGAGTTGGGGAATTTGATTCCTTCGGCGAGTGAAGAGTCGTCGGTGCAAGAGAATGAGATCTACCATCACATGGGTTCCATGGTCAGTGCATCGCTTTCCCAAGCGTTGCAACAAGAACGATATCATGAGAAGCAACAGAAGCAACAAGTACAACAACAACAGCATCCACACTCACATCAACACCATCAAAATTTGATGGTTCCTATTCCACTTGGACTAGAACAGGAACAAGAGAGTGGGTTGCAACTGGTGCACCTGCTTCTAGCATGTGCAGAGGCAGTGGCCAAAGAGGAATACATGCTGGCAAGGAGGTACCTCCAACACCTCAACAGAGTCGTAACACCCCTTGGCGACTCCATGCAACGCGTCGCTTCATGCTTCACTGAGTCTCTAACCGCAAGGCTAGCCACAACATCCACCTCCAATAATGCCAACCCCACACCTTCCTCCACTTTCCCACACTCAAACTCCATGGAAATCCTCAAGATCTACCAGATCGTCTACCAGGCCTGTCCCTATATCAAATTCGCCCACTTCACTGCCAACCAGGCCATCTTCGAGGCCTTCGAGGGCGAAGAGCGGGTCCACGTCATAGACCTCGACATACTCCAGGGATATCAGTGGCCCGCCTTCATGCAGGCCCTGGCCGCCCGATCTAGTGGTGCTCCATTTCTGCGGATCACCGGGGTCGGGCCTAGCATCGAGTCTGTCAAGGAGACAGGCCGATGCCTCACAGAATTGGCCCACTCGCTACGCATCCCTTTCGAATTCCACCCCGTCGGGGAACAACTGGAGAATCTAAAGCCTCACATGTTCAACCGCCGAGTCGGCGAAGCGCTGGCCGTTAATACCGTTAATCAGCTCCACCGTGTCCCCGGTAACGCCCTCGGCAACTTACTCACCATGATAAGGGACCAAGCACCGAGCATAGTGACTCTAGTCGAGCAAGAAGCTAGCCATAACGGGCCTTATTTTCTTGGGAGGTTCTTGGAGGCATTGCATTATTATTCTGCGATTTTCGATTCCTTGGACGCGACGTTTCCACCGGAATCGGCGCAGAGGGCGAAGGTGGAGCAGTACATCTTCGCGCCGGAGATAAGGAACATCGTGGCGTGCGAGGGGCAAGAAAGGGTGGAGAGGCATGAGAGGCTCGAAAAGTGGAGGAAGATCATGGAAGGGAAAGGGTTCAAAGGGGTTCCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATCTTGCTGGGTCTGTATTCTTGCGATGGATATCGGCTTACTGAGGACAAGGGTTGCTTGCTTCTTGGCTGGCAGGATAGGGCCATAATTGCTGCATCGGCTTGGCGCTGCTAA 2007 0.4983 MINSLCGSSVSLKSENSSTKLQPTSSNDSVLQSNKKNNATQSSVDLLEQNNNSTLTPPSLNLPGLKFDLDGDVEVQSPDSSMWESFFSDQLDTDFMMCSPVRNVPSPQQASTYNCNYNYAHSMQAQSFSGCSPPRFLAQIGAYNSSGGGGGGKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEEFQQGEYSSITAANNSSKVGDGSDIVGSSSECFELGNLIPSASEESSVQENEIYHHMGSMVSASLSQALQQERYHEKQQKQQVQQQQHPHSHQHHQNLMVPIPLGLEQEQESGLQLVHLLLACAEAVAKEEYMLARRYLQHLNRVVTPLGDSMQRVASCFTESLTARLATTSTSNNANPTPSSTFPHSNSMEILKIYQIVYQACPYIKFAHFTANQAIFEAFEGEERVHVIDLDILQGYQWPAFMQALAARSSGAPFLRITGVGPSIESVKETGRCLTELAHSLRIPFEFHPVGEQLENLKPHMFNRRVGEALAVNTVNQLHRVPGNALGNLLTMIRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGQERVERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02766 668 PANTHER GRAS FAMILY PROTEIN RAM1 38 666 - -
Aip06g02766 668 MobiDBLite consensus disorder prediction 258 283 - -
Aip06g02766 668 ProSiteProfiles GRAS family profile. 295 667 IPR005202 -
Aip06g02766 668 MobiDBLite consensus disorder prediction 268 282 - -
Aip06g02766 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 666 IPR005202 -
Aip06g02766 668 Pfam GRAS domain family 304 667 IPR005202 -
Aip06g02766 668 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02766 Aip-Chr6 118823665 118826135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02766 298 668 GRAS Transcription Factor Family AT1G66350 45.358 2.88e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip06g02766 GRAS 2.5e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02766 - - gmx:100805039 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02766 06 118823665 118826135 Aip06g02766 06 118823665 118826135 ECH