Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02750 ATGGATAACAGGTTGGCCACAAACTCCTCTTATGCTTCTCTTAGATTGCCCGTTGGCTACAGATTCTGCCCCTCTGACGAGGTTTTTGTCTCTTGCTACCTCAAAAACAAGGCCCTTTCAAAAACATTGGATTTTGATGTTGTTCCTGTCTTCGATGTCTTCAACACTGAGCCCAAGAATCTCCCTTCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTTATGTGGAAAGGTGTTTCTGGAGACAAAGTACTTTTACTTTGATCTGAAAGAGCGTGTGTTTGAAGACAATAACAAGATTGAAGCAGGGAAAGGGCACTGGAAAAGGGTGGGGAAAGGGAATCAGGAGCTTCTAAATAACAACAACAAACTCATTGGGTTCAAGACCAAGTTTGTTTTTTGGAGGAAGAAGAACCGCACTCAATTTCTTAAAACTAAGTGGGTTATGTTTGAGTTCCGTGTTTTTCTCAACCCCTCTCAGATAATGTCGTCATGGGCTGGCTACAAAATATATCTGAAGAAGGATAAGAGGAGGAACAAGAAGGCAAAGTTTTCTTGCGAGGAAAGCAGTGATGATGAAGAAGAAGAAGCAGAAAGAGCAAGTGAAGTGAATTTTCCAGATGAGATAAGTGGAATTAACACAGGACCTCCTTCACCAACTTCATCTAATGAATCCTCTGTTACAAGTTAA 756 0.3624 MDNRLATNSSYASLRLPVGYRFCPSDEVFVSCYLKNKALSKTLDFDVVPVFDVFNTEPKNLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLCGKVFLETKYFYFDLKERVFEDNNKIEAGKGHWKRVGKGNQELLNNNNKLIGFKTKFVFWRKKNRTQFLKTKWVMFEFRVFLNPSQIMSSWAGYKIYLKKDKRRNKKAKFSCEESSDDEEEEAERASEVNFPDEISGINTGPPSPTSSNESSVTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02750 251 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 16 63 - -
Aip06g02750 251 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 96 203 - -
Aip06g02750 251 ProSiteProfiles NAC domain profile. 16 195 IPR003441 GO:0003677|GO:0006355
Aip06g02750 251 Gene3D NAC domain 25 201 IPR036093 GO:0003677|GO:0006355
Aip06g02750 251 SUPERFAMILY NAC domain 8 65 IPR036093 GO:0003677|GO:0006355
Aip06g02750 251 MobiDBLite consensus disorder prediction 229 251 - -
Aip06g02750 251 SUPERFAMILY NAC domain 103 195 IPR036093 GO:0003677|GO:0006355
Aip06g02750 251 MobiDBLite consensus disorder prediction 204 251 - -
Aip06g02750 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 63 - -
Aip06g02750 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 96 203 - -
Aip06g02750 251 Pfam No apical meristem (NAM) protein 17 176 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02750 1 196 NAC Transcription Factor Family AT5G13180 27.805 2.79e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip06g02750 NAM 2.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02750 - - aip:107604830 348.977