Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip06g02744 | ATGATTGCAGGGAGTCCAAGGAGTGAGACACGTGACATGCATTTTTGCAAGGAAAGAAAAGACGCATACTGTGTCAAGATTCAAGGCAATATCCAATCCCCGGCCCTAAAAGGTGCTTCCATATATTTACTCTCCTTCTCTCTCAGGAAAAAATCTGCTTCCTTCGAAATGTTATTCAGAAAGTTATTCAACAGAGTCGAAGACATTTTCACGGAGCGTAACGACCCGCTTATATGGAGTAGAGAGTTGGAACGACATTTCAGTGGGTCGTACTCCTATGCTTGCGTGAGAGCTCGACCTGGACCCCAACTTGAGTTCAGACATGTAGAGCTTGGCTCCAGAGCAACTTTGGTAGGGATTTATGATGGCCACAATAGTCTCGAAATGGCTTTGCATGCTTATGAGAACCTTTTTGATCTTTTAATTGATAACATTTTAAGGAAGCTAATAATCGATGAAGAGAAGGTGACTCAAGTGGTCTCTATATCTTTAGGGGATACGTATCTCAGGTATGATGATTGTGCAGTTCAAGCTCCTGATTTAGTAAGTTTTCAAATTCGAGGACAAACGAGTAGGCCTTACCTTATTATTGAAGTGCAATGCCCAGCACAGACAGGGAGTCCAAGGAGTGAGACACGTGACATGCATTTTTGTAAGGAAAGAAAAGACGCATACTATGTCAAGATTCAAGGCAATATCCAATCCCTGGCCCTAAAAGGTGCTTCCCTATATTTACTCTCGTTCTCTCTCAGGAAAAAACCTGCTCCCTTCGAAATGTTATTCAGAAAGTTATTCAAGAGAGTCGAAGACATTTTCACGGAGCGTAACGACCCGCTTATATGGAGTAGAGAGTTGGAACGACATTTCAGTGGGTCGTACTCCTATGCTTGCGTGAGAGCTCGACCTGGACCCCAACTTGAGTTCAGTCATGTAGGGCTTGGCTCCAGAGCAACTTTGGTAGGGATTTATGATGGCCACAATAGTCTCGAAGTGGCTTTGCATGCTTATGAGAACCTTTTTGATCTTTTAATTGATAAAATTTTAAGAGAGCGAATAATCGATGAAGAGAAGATGACTCAAGCAGTAGATGCCATGGAGAACCAAATTATAGCGCTTTCAAGGGAGGATATAACCCAAAAGTTTGCCACTGTTGGATCATGTTGCTTGATTATTTTAATATACATGGACCTACTTTATGTTAGAAATCTTGGTGCCGGAAAATGCGTTCTTGGACGTAAGTATGGTAGAACATTTGTTACGGACCAAGTTAACGATGTTGATAAACTTCAAGATGAACCTGCAAGATTTCATTTTCAACGCCAACATCCTAAGCCGCATGCATTTACTGCGGATGATTCCGGAGTCTTTTTGGTCAAAGGCAAAGTTAAGGTCTCTAAATCTTTAGGGGATGCGTATCTCAAGTATGATGATTGTGCAATTCAAGCTCCTGATTTAGTGCGTTTTCATATTCGAGGACAAACGAGTAGGCCTTACCTTACTGTTGAAGTGCAAAGCTCAGCACAGACAGTCAGGAGGAACGAGGCAATACCAAAGGTATCTGTGCGAGCATTCATTGAAGCCAATCAAAATTCAAGTGGGTCGTACTCCTATTCTTGCGTGAGAGCTCGACCTGGACCCCAACTTGAGTTCAGTCATGTAGAGCTTGGCTCTAGAGCAACTTTGGTAGGGATTTATGATGGCCACAATAGTCTCGAAGTGGCTTTGCATGCTTATGAGAACCTTTTTGATCTTTTAATTGATAAAATTTTAAGAGAGCGAATAATCGATGAAGAGAAGATGACTCAAGCAGTAGATGCCATGGAGAACCAAATTATAGCGCTTTCAAGGGAGGATATAACCCAAAAGTTTGCCACTGTTGGATCATGTTGCTTGATTATTTTAATATACATGGACCTACTTTATGTTAGAAATCTTGGTGCCGGAAAATGCGTTCTTGGACGGGATGCGTATCTCAAGTATGATGATTGTGCAGTTCAAGCTCCCGATTTAGTGCGTTTTCATATTCGAGGACAAACGAGTAGGCCTTACCTTACTGTTGAAGTGCAAAGCCCAGCACAGACAGGTAGACTCCTTAGCCGGCCAGCAAAATTTGTCATAATTGCATTAAATGGCCTTTGGGACTTTTTGTCCAATGAAGAAGCGACGAGAATCGTCCAAACTCATCCAAAAGAGGGGATTGCACGTATACTGATCCAAGAGGCACAAAAGGTGGTAGCGAGAATTAATCGTTACGCATACATCAATCTTTGA | 2271 | 0.4214 | MIAGSPRSETRDMHFCKERKDAYCVKIQGNIQSPALKGASIYLLSFSLRKKSASFEMLFRKLFNRVEDIFTERNDPLIWSRELERHFSGSYSYACVRARPGPQLEFRHVELGSRATLVGIYDGHNSLEMALHAYENLFDLLIDNILRKLIIDEEKVTQVVSISLGDTYLRYDDCAVQAPDLVSFQIRGQTSRPYLIIEVQCPAQTGSPRSETRDMHFCKERKDAYYVKIQGNIQSLALKGASLYLLSFSLRKKPAPFEMLFRKLFKRVEDIFTERNDPLIWSRELERHFSGSYSYACVRARPGPQLEFSHVGLGSRATLVGIYDGHNSLEVALHAYENLFDLLIDKILRERIIDEEKMTQAVDAMENQIIALSREDITQKFATVGSCCLIILIYMDLLYVRNLGAGKCVLGRKYGRTFVTDQVNDVDKLQDEPARFHFQRQHPKPHAFTADDSGVFLVKGKVKVSKSLGDAYLKYDDCAIQAPDLVRFHIRGQTSRPYLTVEVQSSAQTVRRNEAIPKVSVRAFIEANQNSSGSYSYSCVRARPGPQLEFSHVELGSRATLVGIYDGHNSLEVALHAYENLFDLLIDKILRERIIDEEKMTQAVDAMENQIIALSREDITQKFATVGSCCLIILIYMDLLYVRNLGAGKCVLGRDAYLKYDDCAVQAPDLVRFHIRGQTSRPYLTVEVQSPAQTGRLLSRPAKFVIIALNGLWDFLSNEEATRIVQTHPKEGIARILIQEAQKVVARINRYAYINL | 756 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip06g02744 | 756 | ProSiteProfiles | PPM-type phosphatase domain profile. | 292 | 523 | IPR001932 | - | |
| Aip06g02744 | 756 | Gene3D | - | 538 | 666 | IPR036457 | - | |
| Aip06g02744 | 756 | Coils | Coil | 355 | 375 | - | - | |
| Aip06g02744 | 756 | CDD | PP2Cc | 554 | 753 | IPR001932 | - | |
| Aip06g02744 | 756 | PANTHER | ALPHABET, ISOFORM E-RELATED | 273 | 483 | - | - | |
| Aip06g02744 | 756 | PANTHER | ALPHABET, ISOFORM E-RELATED | 655 | 751 | - | - | |
| Aip06g02744 | 756 | PANTHER | ALPHABET, ISOFORM E-RELATED | 549 | 653 | - | - | |
| Aip06g02744 | 756 | PANTHER | ALPHABET, ISOFORM E-RELATED | 66 | 161 | - | - | |
| Aip06g02744 | 756 | Coils | Coil | 597 | 617 | - | - | |
| Aip06g02744 | 756 | Gene3D | - | 667 | 751 | IPR036457 | - | |
| Aip06g02744 | 756 | ProSiteProfiles | PPM-type phosphatase domain profile. | 534 | 756 | IPR001932 | - | |
| Aip06g02744 | 756 | SMART | PP2C_4 | 526 | 745 | IPR001932 | - | |
| Aip06g02744 | 756 | Pfam | Protein phosphatase 2C | 316 | 491 | IPR001932 | - | |
| Aip06g02744 | 756 | SUPERFAMILY | PP2C-like | 313 | 486 | IPR036457 | - | |
| Aip06g02744 | 756 | SUPERFAMILY | PP2C-like | 555 | 743 | IPR036457 | - | |
| Aip06g02744 | 756 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 655 | 751 | - | - | |
| Aip06g02744 | 756 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 549 | 653 | - | - | |
| Aip06g02744 | 756 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 66 | 161 | - | - | |
| Aip06g02744 | 756 | Gene3D | - | 300 | 515 | IPR036457 | - | |
| Aip06g02744 | 756 | PANTHER | PROTEIN PHOSPHATASE 2C 68-RELATED | 273 | 483 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip06g02744 | Aip-Chr6 | 117923649 | 117928949 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip06g02744 | 526 | 756 | PP2C-type Phosphatase Gene Family | AT5G06750 | 29.110 | 1.90e-22 | 98.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip06g02744 | K01102 | - | adu:107494665 | 214.542 |