Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02716 ATGGATGACGAAGAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTGGTTATCATTAGCGGAACAACTAATGGATTGTCTTACATGCATCATGATTGTTTCCTGCCAATAGTTCACAAAGATGTAACAAACAACAACATTTTGTTGAACTCAGAGTTGCATGTTGTTGTCTCAGACTTTGGAACTGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATAGGTACCTTGCACAAGAGTTGGCTCATACAATGACTGTGACAGAAAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTGGAAACTTTAATGGGGGGCACCCAAGAGAGCTAA 351 0.4046 MDDEEAKELSWSKRVVIISGTTNGLSYMHHDCFLPIVHKDVTNNNILLNSELHVVVSDFGTARLLDPDSSNQTLQVGTYRYLAQELAHTMTVTEKCDVYSFGVVALETLMGGTQES 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02716 116 Pfam Protein kinase domain 13 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02716 116 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 112 - -
Aip06g02716 116 ProSitePatterns Tyrosine protein kinases specific active-site signature. 36 48 IPR008266 GO:0004672|GO:0006468
Aip06g02716 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02716 116 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 112 - -
Aip06g02716 116 SUPERFAMILY Protein kinase-like (PK-like) 8 111 IPR011009 -
Aip06g02716 116 Gene3D Transferase(Phosphotransferase) domain 1 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02716 Aip-Chr6 117066884 117067340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02716 4 111 Receptor kinase-like Gene Family AT2G35620 48.624 6.24e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02716 Pkinase 8.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02716 - - gmx:100789677 171.4