Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02715 ATGCATCATGATTGTTTTCCGCAAATAGTTCACAAAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGGTGCATGTTGTTGTCTCAGACATTGGAACTGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATGGGTACTTTGCACCAGAGTTGGCTCATACAATGACTGTGACAGAAAAGTGTGACGTCTATAATTTTGCAGTGGTGGCATTGGAAACTTTAATGGGAGGCACCCAAGAGAGCTAA 270 0.4 MHHDCFPQIVHKDVTSNNILLNSEVHVVVSDIGTARLLDPDSSNQTLQVGTYGYFAPELAHTMTVTEKCDVYNFAVVALETLMGGTQES 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02715 89 SUPERFAMILY Protein kinase-like (PK-like) 1 84 IPR011009 -
Aip06g02715 89 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Aip06g02715 89 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 84 - -
Aip06g02715 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02715 89 Pfam Protein kinase domain 8 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02715 89 Gene3D Transferase(Phosphotransferase) domain 1 1 88 - -
Aip06g02715 89 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02715 Aip-Chr6 117064816 117065191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02715 1 84 Receptor kinase-like Gene Family AT2G35620 49.412 1.32e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02715 Pkinase 4.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02715 - - zju:107415213 143.28