Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02711 ATGTTGTCACAAATCCGTCACAGAAACATTGTCAAGCTCCATGGATTTTGTCTCCACCATCGGTGCATGTTTTTGGTATACGAATACATGGGAAGAGGAAGCTTATTTTATGCCTTGAACATGGATGATGAAGAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTGGATATCATTAGCGGAACAGTTAATGGATTGTCTTACATGCATCATGATTGTTTTTCGCAAATAGTTCACAAAGATGTAACAAGCAACAAAATTTTTTTGAACTCAGAGTTGAGTGTTGTTGTCTCAGACTTTGGAAATGCTAGACTTCCTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATGGGTACTTTGCACCAGAGTTGGCTCATACAATGACTGTGACAGAAAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTGGAAAATTTAATGGGAGGCACCCAAGAGAGCTAA 471 0.3949 MLSQIRHRNIVKLHGFCLHHRCMFLVYEYMGRGSLFYALNMDDEEAKELSWSKRVDIISGTVNGLSYMHHDCFSQIVHKDVTSNKIFLNSELSVVVSDFGNARLPDPDSSNQTLQVGTYGYFAPELAHTMTVTEKCDVYSFGVVALENLMGGTQES 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02711 156 Pfam Protein tyrosine and serine/threonine kinase 1 153 IPR001245 GO:0004672|GO:0006468
Aip06g02711 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02711 156 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 152 - -
Aip06g02711 156 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 152 - -
Aip06g02711 156 Gene3D Transferase(Phosphotransferase) domain 1 1 155 - -
Aip06g02711 156 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02711 Aip-Chr6 117056532 117057108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02711 2 124 Receptor kinase-like Gene Family AT4G08850 55.285 5.53e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02711 PK_Tyr_Ser-Thr 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02711 - - gmx:102667972 235.343