Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02710 ATGAATGATGAAAAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTGGATATCATTAGCGGAACAGCTAATGGACTGTCTCACAGGCATCATGATTGTTTCTCGCCAATAGTTCACAAAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGTTGTTGTCTCAGACTTTGGAAATGCTAGACTTCTTGATCCTGATTCTTCAAATCAGACATTACAAGTTGGAACATATGGGTACTTTGCACCAGAGTTGGCTCATACAATGACTGTGACAAAAAAGTGTGACGTCTATAATTTTGGAGTGGTGGCATTGGAAACTTTAATGGGAGGCACCCAAGAGAGCTAA 351 0.4017 MNDEKAKELSWSKRVDIISGTANGLSHRHHDCFSPIVHKDVTSNNILLNSELHVVVSDFGNARLLDPDSSNQTLQVGTYGYFAPELAHTMTVTKKCDVYNFGVVALETLMGGTQES 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02710 116 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 112 - -
Aip06g02710 116 ProSitePatterns Tyrosine protein kinases specific active-site signature. 36 48 IPR008266 GO:0004672|GO:0006468
Aip06g02710 116 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 112 - -
Aip06g02710 116 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Aip06g02710 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02710 116 SUPERFAMILY Protein kinase-like (PK-like) 7 111 IPR011009 -
Aip06g02710 116 Pfam Protein kinase domain 9 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02710 Aip-Chr6 117054456 117054912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02710 4 111 Receptor kinase-like Gene Family AT2G35620 48.624 6.30e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02710 Pkinase 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02710 - - ahf:112730549 174.096