Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02708 ATGGATGATGAAGAAGCTAAGGAGTTAAGTTGGAGCAAGAGGGTAGATATCATTGGTGGAATAGCTAATGGATTGTCTTACATGCATCATGATTGTTTCCCGCCAATAGTTCACAAAGATGTTACAAGCAACAACATTTTGTTGAACTCAAAGTTGGATGTTGTTGTCTCAGACTTTGGAACTGCTAGACTTCTTAATCCTGTTCTTCAAATCAGATATTACAAGTTGGAACATATGGATACTTTGCACCAGCGCCGTCATCCTTCCTTGCATTTGAATCTGCATATCCACAAACAAGTCTCGCAAGCCACAAGGGTTTACATAATGCTCTTCCTCTCACACTCAAAAAAACCATCCGCTGACCGCCGCCGCACGGCTGCTGCCACCTCGCCGGCTCCTTTGCCTCGGCTCTCCGGCTCCTGTGCATCACCTTCACTGCGTCTTTGCCTCTGCCTCTCCGTCTGCGTCGCCGTCGTGCTTGGTCTCCCTCTTCTCTGCTCGTTGTCTCGTGTGCGTCTCTCGTCGTCGTCAGTCTCCGCACGCCGTCTCTCGTCTTGTTGCTGCTGCTGCCTCCCCTATCCAGTCTCTGCTTCGCCGTGCTTGGTCTCCCTCTTCGCTGCCTGCGTTCTGCCTTCACATCACATCATCAGGGGTTTAAACCATGAGTATTTGGCACTTCTCAATTCTAAGCTTTATGTTTAA 702 0.49 MDDEEAKELSWSKRVDIIGGIANGLSYMHHDCFPPIVHKDVTSNNILLNSKLDVVVSDFGTARLLNPVLQIRYYKLEHMDTLHQRRHPSLHLNLHIHKQVSQATRVYIMLFLSHSKKPSADRRRTAAATSPAPLPRLSGSCASPSLRLCLCLSVCVAVVLGLPLLCSLSRVRLSSSSVSARRLSSCCCCCLPYPVSASPCLVSLFAACVLPSHHIIRGLNHEYLALLNSKLYV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02708 233 PANTHER LEUCINE RICH REPEAT KINASE 2 2 67 - -
Aip06g02708 233 Gene3D Transferase(Phosphotransferase) domain 1 2 109 - -
Aip06g02708 233 SUPERFAMILY Protein kinase-like (PK-like) 8 72 IPR011009 -
Aip06g02708 233 Pfam Protein tyrosine and serine/threonine kinase 5 65 IPR001245 GO:0004672|GO:0006468
Aip06g02708 233 ProSitePatterns Tyrosine protein kinases specific active-site signature. 36 48 IPR008266 GO:0004672|GO:0006468
Aip06g02708 233 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02708 233 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02708 Aip-Chr6 117038737 117042560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02708 2 67 Receptor kinase-like Gene Family AT4G08850 54.545 1.07e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02708 PK_Tyr_Ser-Thr 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02708 - - ghi:107947983 106.301