Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02705 ATGCACCCAACCTCATTATCATGGAGCCGCCTTCGTCTTCCTTCAATAATTCGGAAAGACAGTCAGAGTGGTTGGTGGGGAAGTCATCACGCCAATGACTCAAACCATTGCGATTGGAGGGGCATCAATTGCAATGATGCTGGAAGTGTTTTAGGGATTTACGGATGGGAATTGAATTATGAATCCAAATTATTGCGGCTTCAGACCTTGAACTTCACGGCCTTCCCCAATTTGGTTTCTCTGAGTCTTGATGGAATGGGGCTTACGGGAAGTATTCTCAAAGAAATTGGTACTCTCACAAAGTTTTCTTATGTTGTTTTGTCGAATAATAGTCTTTATGAGTTGCATATTGTTGTCTCGGACTTCGGAACTGCTAGACTTCTTGATCTTGATCTTCAAATCAAACATTATAAGTTGGAACATATGGATACTTGCACCAGATACTGCATAGGAACTGGTGCATATGGCAGTGTGTATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCATTGAAGAAACTTCATCAATTGGAGTCTCAAAATCCTTCTTTTGACAAGAGTTTCCGCAATGAGGTCAAGATGTTAACACAAATCATCCATAGAAACATTGTCAAGTTTCATGGATTTTGTCTTCATAATCGGTACTTTGGCACAGCTAGACTTATTGATCCTGATTCTTCAAACCAAACCTTGCAAGTTGGAACATACGAATATCTTGCACCAGAATTGGCCTACATGTTGACTTTGACAGAAAAATGTGATGTATACAGTTTTGGAGTGGTGGCATTGGAAACATTAATGGGAAGACACATGGGAGATCTAATCTCGTCTTTGTTCGAATCTTCTAGCAAAAACATAATAGTAAAAGATCTCTTGGACTCACGCATCCATTTACCATCATGTCAAAAAGACATTCAAGTTATAGTTCAGGTGGTAACATTGGCATTGGCATGCTTGCACTCTAATTCAAAGTCAAGACTATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGATTTTGCCTTTGTCTGAAATCACAGTCCAACAGTTGATAGCTTAG 1077 0.3946 MHPTSLSWSRLRLPSIIRKDSQSGWWGSHHANDSNHCDWRGINCNDAGSVLGIYGWELNYESKLLRLQTLNFTAFPNLVSLSLDGMGLTGSILKEIGTLTKFSYVVLSNNSLYELHIVVSDFGTARLLDLDLQIKHYKLEHMDTCTRYCIGTGAYGSVYRAQLPSGKVVALKKLHQLESQNPSFDKSFRNEVKMLTQIIHRNIVKFHGFCLHNRYFGTARLIDPDSSNQTLQVGTYEYLAPELAYMLTLTEKCDVYSFGVVALETLMGRHMGDLISSLFESSSKNIIVKDLLDSRIHLPSCQKDIQVIVQVVTLALACLHSNSKSRLSMQQVAHELSNFKQSSLILPLSEITVQQLIA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02705 358 Gene3D Phosphorylase Kinase; domain 1 129 216 - -
Aip06g02705 358 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 146 214 - -
Aip06g02705 358 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 216 356 - -
Aip06g02705 358 ProSiteProfiles Protein kinase domain profile. 144 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02705 358 SUPERFAMILY L domain-like 33 132 - -
Aip06g02705 358 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 214 - -
Aip06g02705 358 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 24 113 - -
Aip06g02705 358 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 216 356 - -
Aip06g02705 358 Gene3D Ribonuclease Inhibitor 15 122 IPR032675 -
Aip06g02705 358 Pfam Protein kinase domain 216 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02705 358 Pfam Protein kinase domain 150 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02705 358 SUPERFAMILY Protein kinase-like (PK-like) 149 343 IPR011009 -
Aip06g02705 358 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Aip06g02705 358 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 24 113 - -
Aip06g02705 358 Gene3D Transferase(Phosphotransferase) domain 1 217 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02705 Aip-Chr6 117013214 117019291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02705 147 214 Receptor kinase-like Gene Family AT4G08850 47.887 7.83e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip06g02705 Pkinase 2.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02705 - - ahf:112730550 246.128