Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02703 ATGGCGAGCAGGTACTGGGTGGTGTCTCTTCCCGTTCACAACTCCGCTTCCACTCTCTGGAACCAGCTCCAGGATCAAATCTCCAAGCACTCTTTCGACACCCCTCTCTACAGGTTCAACATCCCTAATCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCTCTCAGCGATGATCTCGCTAAGTCCAACACTTTCATGGAAGGAGTGTCGCACAAGATCCGGCGCCAGATTGAGGAACTTGAGAGGATCTCCGGCGTCGAGAGCAGCGGTCTCACTGTCGATGGTGTCCCTGTTGATTCCTATTTAACCAGATTTGTTTGGGATGAAGCAAAGTACCCCACTATGTCGCCATTGAAAGAGATCGTTGATGGAATTCATGGTCAAGTAGCAAAGATAGAGGATGATCTCAAGGTTCGTGTTTCTGAGTACAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCCTAGCTGTCCGTGACCTTTCCAACTTGGTAAAACCTGAGGATATTATAACTTCAGAACATTTAACTACTCTCCTTGCCATTGTTTCCAAGTATTCACAAAAGGATTGGCTCGCAAGCTACGAAACACTGACAAACTATGTGGTCCCCAGATCTTCCAAGAAGTTGTATGAGGATAATGAATATGCTCTTTACACTGTAACACTCTTCAATCGTGTTGCGGACAACTTCAGAACTAGTGCACGTGAAAAAGGGTTTCAAATTCGTGATTTTGAATACAGTCCAGAAACACACGAGGGGCGAAAGCAGGAGTTAGATAAATTGATGCGGGATCAGGAAAGTTTGAGAGGTTCTTTGTTGCAGTGGTGCTATACCAGCTATGGAGAGGTTTTCAGCTCGTGGATGCATTTCTGTGCTGTACGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTACCACCATCTTTCTTGGCATGTGTTTTAGCTCCATCTGTAAAAGCTGAAAAGAAAGTACGTTCTATCCTTGAAGGTTTGAGTGATAGCACAAACAGTTCATACTGGAAGTCTGAGGATGATGTAGGGATGGCGGCCCTAGCGGGTGAGGATGCCCACCCCTACGTGTCCTTCACAATCAATCTTGTTTGA 1122 0.459 MASRYWVVSLPVHNSASTLWNQLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNTFMEGVSHKIRRQIEELERISGVESSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAIVSKYSQKDWLASYETLTNYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHEGRKQELDKLMRDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSTNSSYWKSEDDVGMAALAGEDAHPYVSFTINLV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02703 373 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 372 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aip06g02703 373 Gene3D - 41 312 - -
Aip06g02703 373 CDD V-ATPase_C 5 370 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aip06g02703 373 Pfam V-ATPase subunit C 5 366 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aip06g02703 373 Gene3D Vacuolar atp synthase subunit c; domain 1 5 334 - -
Aip06g02703 373 Gene3D - 163 251 - -
Aip06g02703 373 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 372 - -
Aip06g02703 373 SUPERFAMILY Vacuolar ATP synthase subunit C 2 372 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02703 1 372 Primary Pumps ATPases(2) AT1G12840 83.957 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02703 K02148 - gmx:100803728 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02703 06 116996233 117000900 Aip06g02703 06 116996233 117000900 ECH