Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02702 ATGGCTTTCTCAGCAGACTCTTCTCGCCGCAACTCCCTCATCCCTTCCTTCCTCTACTCTTCCTCCTCCTCCGCCAAAACCCTATCCTTCCAGAAGATTCTCACCTCCCCCTCCTCCTCTCCCGCCGCAGCACCTTCCGGCGGCAACGGTGGCGCCTTCATGATTCCCTCTCCCAGCGAGCCCGGCAAGATCGAGATGTACTCTCCGGCCTTCTACGCCGCCTGTACCGCCGGCGGAATCCTCAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTTGACCTCGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGTATCTCCTCTGGTTTTGGAGTTCTGCTGAAGGAGCAGGGAGTCAGAGGCTTCTTCAGGGGATGGGTGCCAACTTTGCTTGGTTATAGTGCTCAAGGTGCTTGCAAGTTTGGATTTTATGAATTCTTCAAAAAGTACTACTCTGATCTGGCTGGCCCAGAATATGCAACCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCTGATATTGCACTTTGCCCATTTGAGGCCGTGAAGGTCCGTGTTCAAACTCAGCCCGGCTTTGCTAGGGGTCTGGCTGATGGGTTGCCGAAGTTTGTCAGATCTGAAGGAACCTTGGGATTGTACAAGGGATTGGTGCCTCTGTGGGGACGACAAATTCCATACACAATGATGAAATTTGCTTCTTTTGAGACCATTGTGGAGATGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAAAGTCTCCAACTCGGTGTGAGTTTTGCTGGTGGATATGTTGCGGGTGTGTTCTGTGCCATTGTGTCACATCCTGCCGATAACCTTGTCTCTTTCCTCAACAATGCCAAGGGAGCAACCGTTGGTGATGCTGTGCAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGAGGTCTCCCACTGCGTATTGTTATGATTGGAACACTTACAGGAGCTCAATGGGGAATATATGATGCCTTCAAGGTCTTCGTGGGACTGCCAACCACTGGTGGTCCTGCTCCTTCTGCTGTTCCTACCCCCACCGGTGCTGAGCTTGCAAAGGCTTAG 1119 0.5183 MAFSADSSRRNSLIPSFLYSSSSSAKTLSFQKILTSPSSSPAAAPSGGNGGAFMIPSPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPEYATKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPTPKNECSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPSAVPTPTGAELAKA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02702 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Aip06g02702 372 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Aip06g02702 372 Pfam Mitochondrial carrier protein 170 255 IPR018108 -
Aip06g02702 372 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Aip06g02702 372 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 363 - -
Aip06g02702 372 Gene3D Mitochondrial carrier domain 52 162 IPR023395 -
Aip06g02702 372 Gene3D Mitochondrial carrier domain 163 349 IPR023395 -
Aip06g02702 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
Aip06g02702 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Aip06g02702 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 363 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02702 Aip-Chr6 116964352 116967777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02702 7 368 Chloroplast and Mitochondria Gene Families AT5G14040 79.357 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02702 K15102 - gmx:548006 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02702 06 116964352 116967777 Aip06g02702 06 116964352 116967777 ECH