Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02696 ATGGGAAGAGGCAGAGGAATTGCGGCTCTGAAACCCACGGCGGCGGTTACAGTGGCAGAGGTAAACGGATCAGGGCCGATGCCAGTATTAAAGGAAGTTAGATACCACAGCACGAGGAAGAGACCGTGGGGAAGATTCGCCGCCAAAATCAGAGACCCGTTGAAGAAAGCAAGGGTTTGGCTCGGAACCTTCGATTCTGCCGAGGACGCCGCACGCGCTTACGACGCCACCGCAAGAACACTCCGGGGACCAACAGCCAAGACCAATTTTCCTCGCCACTCGGGATCCAGCCCTCGATGTAGAACTGCAGCTTCGCCAGCGCCACTTGCTGCGATGGGAGATTCAACCCCTCCGCTGCTGTTCCGCCACCCTGGATGGCAACTTCCTCCACGGCCAGAGCCGTTTCCTCCATATGCAATTTTTTGTAAGTTGTTGATTCTTCATAAATTGCACAATCTGGACTGGTTGAATTGTGAACTGAGCCTGTGA 489 0.546 MGRGRGIAALKPTAAVTVAEVNGSGPMPVLKEVRYHSTRKRPWGRFAAKIRDPLKKARVWLGTFDSAEDAARAYDATARTLRGPTAKTNFPRHSGSSPRCRTAASPAPLAAMGDSTPPLLFRHPGWQLPPRPEPFPPYAIFCKLLILHKLHNLDWLNCELSL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02696 162 CDD AP2 34 91 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 MobiDBLite consensus disorder prediction 83 101 - -
Aip06g02696 162 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 3 102 - -
Aip06g02696 162 Pfam AP2 domain 39 83 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Aip06g02696 162 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Aip06g02696 162 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 102 - -
Aip06g02696 162 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Aip06g02696 162 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02696 Aip-Chr6 116859630 116860118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02696 1 91 AP2-EREBP Transcription Factor Family AT1G50640 65.934 5.36e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip06g02696 AP2 1.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02696 K09286 - ming:122060235 117.857