Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02690 ATGGCCACTTCTGCCACCACAACCGCTGCAGTGTTGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCCGAGGTTCATCTCGGAACCAAAAACTGCAACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTAACCCATGCTTCTTTGATATTTTCTTTGGGGTTATACTACTA 198 0.4949 MATSATTTAAVLRQLSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGNPCFFDIFFGVILL 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02690 66 PANTHER 40S RIBOSOMAL PROTEIN SA 13 52 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip06g02690 66 Gene3D - 21 59 - -
Aip06g02690 66 SUPERFAMILY Ribosomal protein S2 17 53 IPR023591 -
Aip06g02690 66 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aip06g02690 66 PANTHER 40S RIBOSOMAL PROTEIN SA 13 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02690 Aip-Chr6 116741664 116741861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02690 1 52 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 73.077 2.74e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02690 K02998 - egr:104419506 92.4337