Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02688 ATGAAATTTGATGCTGGTTTTGAATCTGCTGATACATGGGAGAGGCTCCATCTTGCTGTTAGGATTATTGTTGCTATCAAGAACCCTCAGGATATCAAAGTTCGCACAATAGGTGCGAATGCAATTGCTGGAAGGCACACTCCTAGAACATTCACTAATCAAATGCAGACATCCAATAATGAGCCTCGTCTACTCATTCTGACTAATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGTTCTTGGAATTGCCTTGTGCGACACGGATTCTACAATGCGCTATTTTGATGTTGGCACTCCTGCCAATAACAAGGGGAAGCATAGTATTGGTTGTCTGTTTTGGTTATTAAGTGGGACGTGA 363 0.427 MKFDAGFESADTWERLHLAVRIIVAIKNPQDIKVRTIGANAIAGRHTPRTFTNQMQTSNNEPRLLILTNPRTDHQPIKEGVLGIALCDTDSTMRYFDVGTPANNKGKHSIGCLFWLLSGT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02688 120 Gene3D - 7 120 - -
Aip06g02688 120 PANTHER 40S RIBOSOMAL PROTEIN SA 12 117 - -
Aip06g02688 120 PRINTS Ribosomal protein S2 signature 37 54 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip06g02688 120 PRINTS Ribosomal protein S2 signature 62 79 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip06g02688 120 CDD RPS2 12 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip06g02688 120 PANTHER 40S RIBOSOMAL PROTEIN SA 12 117 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip06g02688 120 SUPERFAMILY Ribosomal protein S2 11 118 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02688 Aip-Chr6 116712718 116714319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02688 7 118 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 65.649 6.79e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02688 K02998 - ath:AT1G72370 168.703