Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02685 ATGCCAGCTTTGATGCCATCTAGGTTTTTTCTTCTTGTTGGAGAGTCATTTCCCATTAGAAGAGCATTGGCTACTCATAAAAATGCTTCTTCTTTGTTGCACATAAGTATTCATTGTATGAGCCAAGTGGAACCACCCAATCATGGTTCCTTAACCCTCTCAAGTGTTAGTTTTCAAAGTGAGGTTGATAAACCAATTAACAAAGGTGGCAAGTCTAGCAGTAAGGTAAAGCCATTGTTGGGTTCATCCCCTGGGTCCCTTAAGAGCAAAGGCATAGGGAAACATATTGGTTCCAGTAAGAAGAAGAAAGCGTTTGGGATTGTTGAGCGGAAGAAACAACAAATCAACGCTGCTCCATTTGCAGTAAAATCATTCACTGAACTTGGGTTGCCCCTTGTTCTGATTGAGAGACTGGAGAAAGAGGGGATCAGTGTTCCAACTGAAGTTCAGTCTGCAGCTGTTCCTACCATTCTGCAGAACCATGATGTCATAATTCAGTCTTACACGGGTTCGGGGAAGACATTGGCTTATCTTCTTCCTATACTATCATCTATTGTTCCACTGATGAACAAAGTTTCCAAGAGTTCCAGTGATGGTGATTCTGGTGGGAAAATAGGAATAGAAGCAGTGGTTGTTGCTCTCTCAAGGGAGCTAGGGATGCAGATAGTGAGGGAGTTTAAGAAGATACTAGGAGTGGAGAACAAGAAAGTGGTTCAATAG 720 0.4236 MPALMPSRFFLLVGESFPIRRALATHKNASSLLHISIHCMSQVEPPNHGSLTLSSVSFQSEVDKPINKGGKSSSKVKPLLGSSPGSLKSKGIGKHIGSSKKKKAFGIVERKKQQINAAPFAVKSFTELGLPLVLIERLEKEGISVPTEVQSAAVPTILQNHDVIIQSYTGSGKTLAYLLPILSSIVPLMNKVSKSSSDGDSGGKIGIEAVVVALSRELGMQIVREFKKILGVENKKVVQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02685 239 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 23 239 - -
Aip06g02685 239 MobiDBLite consensus disorder prediction 64 96 - -
Aip06g02685 239 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 123 151 IPR014014 GO:0003724
Aip06g02685 239 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 23 239 - -
Aip06g02685 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 237 IPR027417 -
Aip06g02685 239 Pfam DEAD/DEAH box helicase 147 231 IPR011545 GO:0003676|GO:0005524
Aip06g02685 239 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 154 239 IPR014001 -
Aip06g02685 239 Gene3D - 94 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02685 Aip-Chr6 116691752 116692471 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02685 125 229 Eukaryotic Initiation Factors Gene Family AT5G11200 30.476 4.66e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02685 - - aip:107613119 374.4