Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02683 ATGAAAGCGACAGAGTTGCATGGGGATCTTGGGAAGCTTACTAGGTCATCAAGTTTGAAGAAATTCAAGAATGGCGAGGTGAGAGTTCTTGTGACAAATGAATTATCAGCTAGAGGTTTGGATGTGGCAGAATGTGATCTCATGGTTAATTTGGACTTACCTACGGATTCAACTCACTATGCACACCGAGCAGGCCGAATTGGTCGGCTTGGTAGGGATGGTACAGTGCTAACCATATGTGAAGAGTACGAAGTTTTTATTGTGAAGAAAATGGAGAAGCAGCTTGGAGTAACTATGGCGTTCTGCAATTTTGTTGAGGGAAAGATGCTTGTCAAGCAAGAAGAGAAAGCACTCAGCACTTCAAGAAAATGA 372 0.4274 MKATELHGDLGKLTRSSSLKKFKNGEVRVLVTNELSARGLDVAECDLMVNLDLPTDSTHYAHRAGRIGRLGRDGTVLTICEEYEVFIVKKMEKQLGVTMAFCNFVEGKMLVKQEEKALSTSRK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02683 123 Pfam Helicase conserved C-terminal domain 2 71 IPR001650 -
Aip06g02683 123 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 1 99 - -
Aip06g02683 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 105 IPR027417 -
Aip06g02683 123 Gene3D - 1 123 IPR027417 -
Aip06g02683 123 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 110 IPR001650 -
Aip06g02683 123 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 1 99 - -
Aip06g02683 123 SMART helicmild6 1 71 IPR001650 -
Aip06g02683 123 CDD SF2_C_DEAD 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02683 Aip-Chr6 116690757 116691128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02683 7 105 Eukaryotic Initiation Factors Gene Family AT1G72730 38.384 2.39e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02683 - - aip:107613119 227.254