Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02674 ATGTTTTGTAGCCGCCGACCAGGTCTTATGGTCTCTACAATGCAGGCTCTGGATAACTTTGGATTAGATGTTCAGCAAGCTGTTATTAGTTGCTTCAATGGTTTTGCTTTAGACATCTTCAAAGCTGAGGATCCAAATAAATGTTTACAAATTATAATTACTGTCTcgtcaccgtcgcggatcGAGGCAGCTCTCGCGGATCGAAGCGTCACAATCACCGAAGCATTGGCGTCGTCTGGTCCTCGGCTTAGCATCGTCGTGGTTGTCGTCTGCTTGTCGTCGTCACCAAGCGTTGGTCGTCGTCTGGCTCTGACCTTCTGTGTTCTCCGCCTCTCCCACGatggaggagacatggaagttgagAGAGAGAAAGAGAGTGAGTGTAAGAGAGAGAGAAAGTGCGGAGGGACGCCGCTGTTTCCATCCCATTCCCCACTTATTTTTCCCTCGCCATCACTTCACAACTTGACACACCTCAGTCAAAGCCGCCACCGCACACTCACCACTCACCTTTTTTCCTCCCTCTTCTCAGGGCCCCCAACAAAACGACAGTGTTTCAAAACCCTAACCTCTCATTTATTTTCTAACACACTCCAACAACTCCATTCTCACCCTCTCAACAAAGCTCCTTCATACAAGATCGAGCATTAA 651 0.4501 MFCSRRPGLMVSTMQALDNFGLDVQQAVISCFNGFALDIFKAEDPNKCLQIIITVSSPSRIEAALADRSVTITEALASSGPRLSIVVVVVCLSSSPSVGRRLALTFCVLRLSHDGGDMEVEREKESECKRERKCGGTPLFPSHSPLIFPSPSLHNLTHLSQSRHRTLTTHLFSSLFSGPPTKRQCFKTLTSHLFSNTLQQLHSHPLNKAPSYKIEH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02674 216 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 68 - -
Aip06g02674 216 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 68 - -
Aip06g02674 216 CDD ACT_UUR-ACR-like 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02674 Aip-Chr6 116556031 116562224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02674 1 43 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 81.395 1.61e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02674 - - ahf:112697118 91.6633