Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02666 ATGGTCCTAGATACAGGAAATTATTCTCCCCAGTCGATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCAACCCCCTTCCCAGTTCAGTGCCCAATTTGTTTGGAGTATCCTCTGTGTCCCCAGATAACCTCATGCGGGCATATTTTTTGTTTCCCATGTATACTACAGTACTTGATGCTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGTCAAGGATTTGTATACTGTCCACATAACAAATGTCAAACAATATCAAGTAGGGGATAATATTGAGTTCACATTTTTAACACGAAAAAAGGATTCATTTACTTTATCTCATAAAAATAAACAAGAGACAGATATTGCATCAAGTAGCGATGGAGATTTATGTGATCCGTTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCTGTTAGACACGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGGCTTGTCGATGACCTGGAGAAGCTTCCATATGTTTGTGCTGCAATGCAACAACTAAAACAAAGGAAGAAATATTGGAATGAACATAGGGCTTCTGACATTTCTTCAAGGCTTATTGATTCTGAACATCAGATACAATTGACAGCTGCAAATGCTGTGGATGCTGATGGTGAAACCCATTCTAATGGATCAAGGATTTCCACTGTAGATTTCCAGGACCAAAGTAAGGGAATAATATTGGATAAGTCAACTGCTGAAGCCTGTCCACATCAAACTTTGGAAGGAGAGAAATTGATAGAACAAGAAATCAATCCATCCTCATCATATGAGGAGAAGAATGGTGTTCAAAGGCATTCAAATGGAATTGGAGAGACGAAGGAAAGTGATTCTTACAATTTCTTCCAGGCTGTGGATGGCCAGCATATAATTCTCCATCCACTGAACACGAAATGTTTACTTCATCATTATGGGAGTTATGACATGCTTCCACACAGAATAACGGGAAAGATTCTGCAAATGGAAACGGTTACCCAGTCCGAGGCCATGAGGAGGCGATATAAATTCTTAAGTCATTTTCCGTTGACAACAACTTTTCAGCTTTGTGAAATTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGCGCACACCAGAGGAAACAACTCGCAAAGAAGGAGCAAAAGGAAAAATTCAAGGCGGAAGCTGCTGCCGCTTATTCTTTTCCCATTCCAAGTTATAAACTTGCTTCGTATGATGACACTCCAACATTTTCTATGGATGACTTTGAAGCCTTGGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAAACATTCTCAAATGTTACCCGGCTTGGATTCGCTGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTACCCATAATAATAATACGGTCACTAGTCCTACTGGCACAACAGGTCCGAGAAATGTGGAGACACCATCATATTCCAATGTTACATCCAGAGCCGAATCAAATGTAAACATGAATGCACCAAACACAAATGACTTTGGGAAGAAGCGGAAAAAGCAAAATCGAGTTCTCCTATCGACATCTGGTGGCAGGCGTTACTGA 1668 0.4089 MVLDTGNYSPQSMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDIASSSDGDLCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNEHRASDISSRLIDSEHQIQLTAANAVDADGETHSNGSRISTVDFQDQSKGIILDKSTAEACPHQTLEGEKLIEQEINPSSSYEEKNGVQRHSNGIGETKESDSYNFFQAVDGQHIILHPLNTKCLLHHYGSYDMLPHRITGKILQMETVTQSEAMRRRYKFLSHFPLTTTFQLCEIDLSEMLPPEALAPFMDEIKKRAHQRKQLAKKEQKEKFKAEAAAAYSFPIPSYKLASYDDTPTFSMDDFEALGNSAMSSSPPVVGERKTFSNVTRLGFAAAHDSPSLQIQETSSTHNNNTVTSPTGTTGPRNVETPSYSNVTSRAESNVNMNAPNTNDFGKKRKKQNRVLLSTSGGRRY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02666 555 PANTHER RING FINGER 10 FAMILY MEMBER 1 552 IPR039739 -
Aip06g02666 555 MobiDBLite consensus disorder prediction 481 533 - -
Aip06g02666 555 SUPERFAMILY RING/U-box 20 92 - -
Aip06g02666 555 Pfam Zinc finger, C3HC4 type (RING finger) 37 83 IPR018957 GO:0046872
Aip06g02666 555 CDD RING-HC_RNF10 37 84 - -
Aip06g02666 555 Coils Coil 392 412 - -
Aip06g02666 555 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Aip06g02666 555 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 134 IPR013083 -
Aip06g02666 555 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Aip06g02666 555 SMART ring_2 37 83 IPR001841 -
Aip06g02666 555 MobiDBLite consensus disorder prediction 478 555 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02666 1 505 C3H Transcription Factor Family AT3G26730 57.308 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02666 - - adu:107494651 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02666 06 116496262 116502057 Aip06g02666 06 116496262 116502057 ECH