Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02652 ATGATTAGAACGAAGAAAAGACATCATATAATAAACGTGAGCACCAAGAAAATTTCGATCATTTCAAATGCGAATCCTTCCCCCCCTCTTCCTCCTCTTACTTCTACATCTTCAATCAGCAGAATCAACTTCAGTCGCTCTCAAGTCTCAACGCAGAACAAGTTCCTTCCAAGACCGTTGGTGAATCCAGCACGAAGCTTAAATGGAGTTCTAAAATTGGAGGAGAAGAAACGGTTCTTGGAGAGAAATGATTGCGGCAGTAAAAAGGATCTTCTCTGGAATAATTGCAATCCGGTGTATCAGCCTCCTCAGGATCAGGCTAAGGAGATGGAAGGAAGCTACACAGTCTCTTTGAACATTCGACAACGATCCCAAGTACAGTTTGTGACAGGTGAGACAGTTGGTGTGGATGAAGAAGATGCTGAATATGGGGAGGATTACGAGCAGCAACACAAGCCCGGGATGATTGTCGACGGAATTAGGTCATTTAATAGAATAGATTTTTCTTCTTTGACGTATGAGGAGATGCGGAGGTTTGAGTTTGTGGACTTGCAGACAGCTTATGACTTCTACAATGAGCATGGGCAGATTCAAGGGTTTTCTATTCGGAGGTCAAAGGTTGTAAGAAGCACAAAGATTGGATCGGAGGGAGAAATTTTATGGTATATTTTTGTTTGCTCGAGACAAGGTGAGAGAGACGCCAAACATATTCATCGGGTAGAAAGGAAAATGGATCCTCGACCAATTACACGATGTGGGTGTGGTGCACAAATAAAGGTTCACGTTGATCAAAGCACTAGCCGTTGGTTCGTAGATAAGTTTTGTGATGAACACAACCATGAGATGCTAGATGCAAGGTTCCGGGAGTTGTTGCGTTCTCATAGAGTAATCAAGGAAGGGGACATGCATCAAATTAACTCGATGAGAAAAGCTGGGATGCATGTGCCAACCATATTTCGTGCATTTGCCATCCAATGCGGGAGATTTGAGACAGTTGGATTTGTAATTAAAGACATCTACAATGCAATAGAGAAGTAA 1038 0.4258 MIRTKKRHHIINVSTKKISIISNANPSPPLPPLTSTSSISRINFSRSQVSTQNKFLPRPLVNPARSLNGVLKLEEKKRFLERNDCGSKKDLLWNNCNPVYQPPQDQAKEMEGSYTVSLNIRQRSQVQFVTGETVGVDEEDAEYGEDYEQQHKPGMIVDGIRSFNRIDFSSLTYEEMRRFEFVDLQTAYDFYNEHGQIQGFSIRRSKVVRSTKIGSEGEILWYIFVCSRQGERDAKHIHRVERKMDPRPITRCGCGAQIKVHVDQSTSRWFVDKFCDEHNHEMLDARFRELLRSHRVIKEGDMHQINSMRKAGMHVPTIFRAFAIQCGRFETVGFVIKDIYNAIEK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02652 345 Pfam FAR1 DNA-binding domain 189 283 IPR004330 -
Aip06g02652 345 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 137 291 - -
Aip06g02652 345 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 137 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02652 Aip-Chr6 116289108 116295407 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02652 FAR1 5.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02652 - - ahf:112772626 290.812