Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02633 ATGTCAAGTTCTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGCAGGGATTGTTATAATACTCATATGGTTTTGTATTTTTCGCAAGAGAAGCGTTTCGAGAACTTCAGAGACAGGATCCTCTGATCCTTCCCAAGTAGGACGACATGGCACAATTGAGTTGTCGATACGAGATACTAGGCGTTTTGAGATGGAGGAACTATCTGGGGCTACAAAGAGTTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTCGGGGAGGTTTATAAGGGTTTGCTTCAAGATGGTATGATTGTAGCAATCAAGAAGAGGCGTGGACTCGCGAGTCAGGAGTTTGTTGATGAGGTACGCTATCTCTCATCGATTCACCATCGGAATCTCGTAACTCTTTTAGGCTACTGCCAGGAAAACAACCTGCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGTGCCAATCAACAATCGCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTGATCCTTTGCAAAATCAGTTTGGCTCATCTTCACTCCTTGAGCCCCCGTTTGGTGCACAAGGATTTCAAAACAGCGAATGTACTTGTCGACGAAAACTTCATCGCTAA 666 0.4414 MSSSLAAILGGAAGAVALAGIVIILIWFCIFRKRSVSRTSETGSSDPSQVGRHGTIELSIRDTRRFEMEELSGATKSFSDKNLIGEGKFGEVYKGLLQDGMIVAIKKRRGLASQEFVDEVRYLSSIHHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGANQQSREKLEFKHRLSIAQGAAKGDPLQNQFGSSSLLEPPFGAQGFQNSECTCRRKLHR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02633 221 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Aip06g02633 221 ProSiteProfiles Protein kinase domain profile. 78 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02633 221 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 186 - -
Aip06g02633 221 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 186 - -
Aip06g02633 221 Pfam Protein tyrosine and serine/threonine kinase 82 186 IPR001245 GO:0004672|GO:0006468
Aip06g02633 221 SUPERFAMILY Protein kinase-like (PK-like) 57 186 IPR011009 -
Aip06g02633 221 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02633 Aip-Chr6 115677878 115682238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02633 4 186 Receptor kinase-like Gene Family AT5G56890 35.714 7.78e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Aip06g02633 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02633 - - gmx:100305436 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02633 06 115677878 115682238 Aip06g02633 06 115677878 115682238 ECH