Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02631 ATGATGACCCCTCTCCAATTCTCCACCAGTTCATCTTCGTGGCGCCAGTTGCTCTCCATGGTTTGTAACGTTGCTGCCGTCTGCGACCCCTCCATTGCTGTTTCTCGAGATCACAAGCCGGAGCAAACGGACGAGAGACAAAGGATTGAAAATGCTGGTGGCTTGTTATGTGGGCTAGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCATGCTTTCGGAAGCTGTTGCAATAATAAAGAAAATAGATGATGCAGAGAAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGTTCCGACAACACTACTTGTGTTGTGGTTCGTTTCTTGACGAACCAAGGTGCTGCTTCTGGTACTAGCTCCGGCTAA 381 0.4882 MMTPLQFSTSSSSWRQLLSMVCNVAAVCDPSIAVSRDHKPEQTDERQRIENAGGLLCGLEPGELVAFLPFLMLSEAVAIIKKIDDAEKAAKKLMQEAYQRGSSDNTTCVVVRFLTNQGAASGTSSG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02631 126 SUPERFAMILY PP2C-like 32 113 IPR036457 -
Aip06g02631 126 Gene3D - 67 115 IPR036457 -
Aip06g02631 126 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 28 56 - -
Aip06g02631 126 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 74 120 - -
Aip06g02631 126 PANTHER ALPHABET, ISOFORM E-RELATED 74 120 - -
Aip06g02631 126 Coils Coil 76 96 - -
Aip06g02631 126 PANTHER ALPHABET, ISOFORM E-RELATED 28 56 - -
Aip06g02631 126 Pfam Protein phosphatase 2C 31 56 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02631 Aip-Chr6 115549859 115551025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02631 20 125 PP2C-type Phosphatase Gene Family AT4G31750 39.869 9.03e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02631 K17506 - gmx:100795017 97.0561