Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02628 ATGATCATTGCGAGCTTTCGTGAGATTGGAGAACATAGCAAGGGTTTGGCCGTTTGGACTTTCCAATTCCCAATTCCGAATAAGGATTTTAGCGAGGTATCGATGAGTTTAACGGGTACAGAAAGCTCAGAAGATGGTGCAGGGCATCCGGAACCTCCCGATCCTGATGTTCTTGAAGTTGACCCTACCTGTCGCTATATTAGGTATAAAGAAGTCATCGGCAAAGGAGCTTTCAAAACTGTTTACAAGGCTTTTGACGAAGTCAATGGAATTGAAGTTGCATGGAGCCAGGTTCAAATTGATGATGTGCTACAGTCACCAGGTGACTTAGAGAGGTTGTACTCAGAAGTGCATCTCCTGAGATCACTGGAACACGATAACATAGTAAGATTCTACAATTCATGGATTGATGAGAAGCACAAAACTGTTAACATGATTACCGAGTTGTTTACATCGGGCAGCCTCAAACAGTATCGGAAAAAACACAAGAAGGTTGACATAAAGGCTATTAAGGGATGGGCAAAACAGATATTAACAGGCTTAAGCTACCTCCACAGTCACAACCCACCAATCATACATAGGGACCTGAAGTGTGATAATATATTTATCAATGGTCATCAGGGAGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAGCGAACCAATGCCAAGAGTGTTATTGGAACCCCGGAGTTTATGGCACCAGAGTTGTATGATGAAAATTACAATGAATTAGCGGATATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAATATCCTTATAGTGAATGCAGAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCTGTTGCACTTTCTAAAGTCAAAGATCCAGAGGTAAAATCCTTCATTGAAAAATGTCTTGTCCCAGCATCTGAAAGATTGTCTGCAAGGGAGCTTCTGATGCATTCCATTCTTGACTTGAATGGTTCGACAAGGATTCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAGGCCGATGCTTGATGTCAGAAGGTCCTACTAGTGCACGTCATGGAAATATTTCTATGGATCTTGGTGGCATGAGAAGGGCAAGAAATATCCATTTTATATTCTACCTTGACACTGATACTGCTGTCTCCGTTTCAAGTGAAATGGTTGAGCAACTTGAGCTTGCTGAACAGAATGTCCTCTTCATAGCTGAGTTAATAGATTTGTTACTGCTGAAGTTGGTTCCTGACTGGAAACCTTGTGTTTCAATTGACCATTTGGTTTCTCCAAATGGTAAATATCATGTGACCCAACGTAGAGCCTTGGAGTCGGCCAAATACCAAGAAATCCCAAAACTTTCCAGCCAAATTGTGCCTCAAGAGTTAGGTGCCTTAACCTCAGCTGGAAGATCAGCTGCAGAAGAGAACCATGATAATATGGATTTTGATGAGGTTGTATCTCAAGAGAGCATTGGTATGCAAAGAGCAACTAAGACAGATGATTTGTGTTCTGAGGTGTCGTATGCTTCAGCAACATCAGAACTCAACGATAATAAGCTTTCTGTGGCTTCATTTATGTCTTCTGCTGAATCAGGACTAGCAGACTTAAACATAACTATACCGAATGGAGGGAGTCAATCCTCATTTGTAACTGAAATTGGGGGATCTCCTGATTACAGGATCAAGTTTTCAGAATTGGGAAGTGATGATACGACGAGCTTCTCTACTCATCCTTCCTCCCTGCTTGAACGCGAGGATGAATTCAGAACAGAGCTAGAAATGATTGAACAGAAGTATCACGAGGTAATTAGATTTTTCCAGAAGAAGATACCAGGCCATCATGGAGATTAG 1875 0.4128 MIIASFREIGEHSKGLAVWTFQFPIPNKDFSEVSMSLTGTESSEDGAGHPEPPDPDVLEVDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGIEVAWSQVQIDDVLQSPGDLERLYSEVHLLRSLEHDNIVRFYNSWIDEKHKTVNMITELFTSGSLKQYRKKHKKVDIKAIKGWAKQILTGLSYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLERTNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVKDPEVKSFIEKCLVPASERLSARELLMHSILDLNGSTRIHPFPLPDIVLPKFGAFEGRCLMSEGPTSARHGNISMDLGGMRRARNIHFIFYLDTDTAVSVSSEMVEQLELAEQNVLFIAELIDLLLLKLVPDWKPCVSIDHLVSPNGKYHVTQRRALESAKYQEIPKLSSQIVPQELGALTSAGRSAAEENHDNMDFDEVVSQESIGMQRATKTDDLCSEVSYASATSELNDNKLSVASFMSSAESGLADLNITIPNGGSQSSFVTEIGGSPDYRIKFSELGSDDTTSFSTHPSSLLEREDEFRTELEMIEQKYHEVIRFFQKKIPGHHGD 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02628 624 MobiDBLite consensus disorder prediction 36 57 - -
Aip06g02628 624 SUPERFAMILY Protein kinase-like (PK-like) 69 325 IPR011009 -
Aip06g02628 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 39 345 - -
Aip06g02628 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 375 617 - -
Aip06g02628 624 Gene3D Transferase(Phosphotransferase) domain 1 150 329 - -
Aip06g02628 624 ProSiteProfiles Protein kinase domain profile. 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02628 624 Gene3D Phosphorylase Kinase; domain 1 53 148 - -
Aip06g02628 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 39 345 - -
Aip06g02628 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 375 617 - -
Aip06g02628 624 CDD STKc_WNK 65 324 - -
Aip06g02628 624 SMART serkin_6 67 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g02628 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Aip06g02628 624 Pfam Protein kinase domain 69 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02628 Aip-Chr6 115492014 115495305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02628 54 425 MAP Kinase Kinase Kinase AT5G41990 55.097 2.27e-147 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip06g02628 Pkinase 6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02628 K08867 - qsu:112016416 687.182