Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02626 ATGTGTGAGCCATATATTTCATTACCTGCCATGAATGTGATGGCTTGTGAGCAATTTGATTACTCATTCAGCCCTCCCCCCATGAACCAATTACTCCATGAATATATCTTACAAGATGCATTTCCAAGCCAATCAGATGATCACTTATTATCTTCTCCAAACATCATCTATGATGATGTGTTTGATGAAATGCTTGAGCAAGAGGCCCTGAATGGATTCCTCCATCCAGAAAACTCACAGCAGCCAGACTTTGATTTCATTGGCCATAATGTTACAATGGCTATTGAGTCTGAACTGTGCCAAGAAAACATCCCTATAGCCCAAGAAGAGGAGATGCATGTCTCAAATGAAGAAGGAGATGCATATTTGATGGGAATTCAAGCAGAGCTAATGGGAGAAACTAGTTTGGGAGATCTATTGCTATTAGGAGCTGAAGCTGTTGAAGCACAGAACTTTGTTCTTGCTCTGGACATAATAGAGAGAATTAACAATAATGCATCATCATCATCTTTTTTGGAAAATGGTGATTCTTTATTGAACAGGTTGGCTCTATTCTTTGCTCGGGGTCTGTATTATAAGAGTATAAATGCTCCTCAAGTGCAGTCTGATCCTGTTTCAACACACAACAATGCCTTCGGTGTGTTTCAGATACTCCAGGAACTCTCTCCCTATGTAAAATTCGCTCACTTCACTGCTAATCAAGCCATCTTTGAAGCCACAGAAGGTTCTGAGGATGTTCATGTCATTGATTTTGACATCATGGAGGGGATCCAGTGGCCACCATTGATGATGGACCTTGCAATGAGGAAGAACACTTGTCTTAGAGTAACAGCTGTTGTTGCAGATCAGCAGAGTGTAGCATATGTCCAGCAAACAGGAAGAAGGCTAAAAGAGTTTGCAGATTCTATCGATTTTCCTTTCGCTTTCGATCAGATAGTGATGGTTGGGGAGGAAGATCTTCAAAGAGTTGAACTTGGTCATACAGTTATAGTCAACTGTATGATACACCAATGGATGCCGAACAGAAGCTTCCCATTGATCAAAACATTCCTTGATGGTGTAAGCAAGTTATCACCAAGGCTTGTTGTTTTGGTGGAGGAAGAACTTTTCAACTTTGCTAGGCTAAAATCCATGTCGTTTGTGGAGTTCTTCTGTGAGGCTTTGCACCACTACACTGCACTTAGTGATTCACTTGCTAGTAGTTTGTTGGGTAGGCAGAAGATGGAGCTAACCATGATAGAGAAAGAAGTTATGGGGCAAAGGATTTTGGACAGTGTGAAGCAGTTTCCATGTGAGAGAGAAGAAAGAATGGTGTGGGAAGAAGGGTTTTACTCCTTGAAGAGGTTCAAGCGTGTTGCTATGAGTAGCTGTAATGTTTCACAGGCTAAGTTCTTGGTGAGCTTGTTTGGTGGAGGCTATTGGGCAGGACTCTAG 1434 0.417 MCEPYISLPAMNVMACEQFDYSFSPPPMNQLLHEYILQDAFPSQSDDHLLSSPNIIYDDVFDEMLEQEALNGFLHPENSQQPDFDFIGHNVTMAIESELCQENIPIAQEEEMHVSNEEGDAYLMGIQAELMGETSLGDLLLLGAEAVEAQNFVLALDIIERINNNASSSSFLENGDSLLNRLALFFARGLYYKSINAPQVQSDPVSTHNNAFGVFQILQELSPYVKFAHFTANQAIFEATEGSEDVHVIDFDIMEGIQWPPLMMDLAMRKNTCLRVTAVVADQQSVAYVQQTGRRLKEFADSIDFPFAFDQIVMVGEEDLQRVELGHTVIVNCMIHQWMPNRSFPLIKTFLDGVSKLSPRLVVLVEEELFNFARLKSMSFVEFFCEALHHYTALSDSLASSLLGRQKMELTMIEKEVMGQRILDSVKQFPCEREERMVWEEGFYSLKRFKRVAMSSCNVSQAKFLVSLFGGGYWAGL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02626 477 Pfam GRAS domain family 138 470 IPR005202 -
Aip06g02626 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 473 IPR005202 -
Aip06g02626 477 PANTHER OS12G0162700 PROTEIN 15 473 - -
Aip06g02626 477 ProSiteProfiles GRAS family profile. 127 477 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02626 Aip-Chr6 115488187 115489992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02626 218 468 GRAS Transcription Factor Family AT1G55580 37.050 2.94e-38 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip06g02626 GRAS 9.2e-67 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02626 - - gmx:100804613 606.675