Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02621 ATGAGGAAGGTTGGCAAAAGATGCTACTGTTATATGAGGGGTGAGGTAGGGCAAGGAGGAGCTGAGGGGGACTCTAAGTTTGTTGCTGCCACATTCCTAGGGTTCTCTTCTTCGGAGTTTCTCCTGCCGCTACTTATTTTTTTTGTCAGCATGGTTCTGCAGAACGATATTGATTTGCTTAATCCTCCGGCTGAGCTTGAGAAGAGGAAGCACAAGCTCAAGCGTCTTGTTCAGTCTCCTAATTCTTTCTTCATGGATGTGAAATGCCAAGGTTGCTTCAACATTACCACTGTATTCAGCCATTCTCAGACCGTAGTGGTGTGTGGAAACTGCCAAACGATCTTGTGCCAGCCCACTGGTGGAAGAGCAAGGCTAACCGAGGGCTGCTCCTTTAGGAAGAAGGGAGACTAA 411 0.4769 MRKVGKRCYCYMRGEVGQGGAEGDSKFVAATFLGFSSSEFLLPLLIFFVSMVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGRARLTEGCSFRKKGD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02621 136 Pfam Ribosomal protein S27 80 134 IPR000592 GO:0003735|GO:0005840|GO:0006412
Aip06g02621 136 Gene3D - 55 135 IPR023407 -
Aip06g02621 136 PANTHER 40S RIBOSOMAL PROTEIN S27 49 135 IPR000592 GO:0003735|GO:0005840|GO:0006412
Aip06g02621 136 Hamap 30S ribosomal protein S27e [rps27e]. 74 134 IPR000592 GO:0003735|GO:0005840|GO:0006412
Aip06g02621 136 ProSitePatterns Ribosomal protein S27e signature. 88 120 IPR000592 GO:0003735|GO:0005840|GO:0006412
Aip06g02621 136 PANTHER 40S RIBOSOMAL PROTEIN S27-RELATED 49 135 - -
Aip06g02621 136 SUPERFAMILY Zn-binding ribosomal proteins 80 134 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02621 Aip-Chr6 115405813 115407318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g02621 51 136 Cytoplasmic Ribosomal Protein Gene Family AT3G61110 96.512 1.10e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02621 K02978 - minc:123230388 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g02621 06 115405813 115407318 Aip06g02621 06 115405813 115407318 ECH