Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g02600 ATGCGTCCGCCGCCGCTCCCTGCGTCCGCCGCCGCTCCCTGCTTCTGCCGCCGCCGCGCAGGACTCTGCCTAAACGCTTGGAGAGGAGCCTGTGGGTTGGGTCTGCTACTTCACCATCAACGAAGAGGAACGGAGGCACCAAAGCGCGACATCAACGACGGTAACCTGGCGGCTTTGGACAAGGCAACGATAACCCAGAAACGGCGGAGCTTTCACTCCCGCAACGACGGGATCTTCGAGCTCAACGGAAGCGAAGAGGAACGGGAAGTTATGGGTCAAGAATTTTCTCACGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGAAAGAAAAATATGAGGAAGTTGACGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACACCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAAGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAGGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACTCCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCATGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAATGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCATGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGcacaaactcatagtaaagtccagaaatgtgaattttga 1056 0.4602 MRPPPLPASAAAPCFCRRRAGLCLNAWRGACGLGLLLHHQRRGTEAPKRDINDGNLAALDKATITQKRRSFHSRNDGIFELNGSEEEREVMGQEFSHEGVNSEHTSYDQYEQEKEKYEEVDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNTRDEDVCHFHFSDVDIAFEFYNRYAKTRGFSARKNRTRKSRAGALKLRNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIHVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKNGGISVGQIYRALANQACGYEYLSFTQRDMYNKIAKQRRQLPGDAQTHSKVQKCEF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g02600 351 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 112 281 - -
Aip06g02600 351 Coils Coil 100 127 - -
Aip06g02600 351 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 112 281 - -
Aip06g02600 351 Pfam FAR1 DNA-binding domain 179 269 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g02600 Aip-Chr6 114657296 114659450 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g02600 FAR1 7.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g02600 - - ahf:112723376 483.796